myRT

myRT report for GCA_003306835.1_ASM330683v1

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Seq: BGYZ01000010.1 Escherichia coli TUM18772 DNA, sequence010, whole genome shotgun sequence (187662 bp)
Overview 1 RT 1: 7194-11067 bp Neighborhood of RT #1 [7194, 11438] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 7194-7370 bp Feature: gene Location: 7778-8482 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: gene Location: 8460-9830 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8688-9294 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 8688-9294 bp Feature: gene Location: 9943-10527 bp Feature: domain Description: Caudo_TAP Location: 10159-10516 bp Feature: domain Description: Caudo_TAP Location: 1 01 59-1 051 6 bp Feature: gene Location: 10536-11438 bp Feature: domain Description: Macro_Appr_pase Location: 10554-11067 bp Feature: domain Description: Macro_Appr_pase Location: 1 0554-1 1 067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: BGYZ01000023.1 Escherichia coli TUM18772 DNA, sequence023, whole genome shotgun sequence (51462 bp)
Overview 1 RT 1: 45148-49089 bp Neighborhood of RT #1 [45148, 49089] RVT-Retrons Feature: gene Location: 45148-45387 bp Feature: gene Location: 45694-45870 bp Feature: gene Location: 45943-47715 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46102-46720 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46102 -4672 0 bp Feature: gene Location: 47737-47904 bp Feature: gene Location: 47950-49089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: BGYZ01000059.1 Escherichia coli TUM18772 DNA, sequence059, whole genome shotgun sequence (5861 bp)
Overview 1 RT 1: 362-4090 bp Neighborhood of RT #1 [362, 4095] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 362-568 bp Feature: gene Location: 902-1111 bp Feature: gene Location: 1246-3147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513-2344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513 -23 44 bp Feature: domain Description: Intron_maturas2 Location: 2458-2716 bp Feature: domain Description: Intron_maturas2 Location: 2458-2716 bp Feature: domain Description: HNHc Note: nucleases Location: 2890-3052 bp Feature: domain Description: HNHc Note: nucleases Location: 2890-3 052 bp Feature: gene Location: 3342-3794 bp Feature: domain Description: PRK13732 Location: 3348-3792 bp Feature: domain Description: PRK13 73 2 Location: 3 3 48-3 792 bp Feature: gene Location: 3862-4095 bp Feature: domain Description: DUF905 Location: 3892-4090 bp Feature: domain Description: DUF905 Location: 3 892-4090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)