myRT

myRT report for GCA_003311645.1_ASM331164v1

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Seq: QEST01000071.1 Streptomyces sp. PT12 NODE_129_length_1763_cov_1115.66_ID_11541092, whole genome shotgun sequence (1763 bp)
Overview 1 RT 1: 90-1263 bp Neighborhood of RT #1 [90, 1340] RVT-GII GIIM Feature: gene Location: 90-1340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 306-966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 306-966 bp Feature: domain Description: GIIM Note: maturase Location: 1047-1263 bp Feature: domain Description: GIIM Note: maturase Location: 1 047-1 263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QEST01000052.1 Streptomyces sp. PT12 NODE_270_length_256_cov_0.711443_ID_11270778, whole genome shotgun sequence (256 bp)
Overview 1 RT 1: 2-230 bp Neighborhood of RT #1 [2, 253] RVT-GII Feature: gene Location: 2-253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-2 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QEST01000282.1 Streptomyces sp. PT12 NODE_29_length_75617_cov_353.557_ID_11536370, whole genome shotgun sequence (75617 bp)
Overview 1 RT 1: 27782-32584 bp Neighborhood of RT #1 [27782, 32631] PRK05755 GT4_PimA-like RVT-CRISPR-like GT4_PimA-like nirV Feature: gene Location: 27782-28615 bp Feature: domain Description: PRK05755 Location: 27800-28538 bp Feature: domain Description: PRK05755 Location: 27800-2853 8 bp Feature: gene Location: 28612-30009 bp Feature: domain Description: GT4_PimA-like Location: 28678-29881 bp Feature: domain Description: GT4_PimA-like Location: 28678-29881 bp Feature: gene Location: 30027-31220 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 30651-31188 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3 0651-3 1188 bp Feature: gene Location: 30827-31939 bp Feature: domain Description: GT4_PimA-like Location: 30845-31913 bp Feature: domain Description: GT4_PimA-like Location: 3 0845-3 1913 bp Feature: gene Location: 31936-32631 bp Feature: domain Description: nirV Location: 32170-32584 bp Feature: domain Description: nirV Location: 3 2170-3 2584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05755 (DNA polymerase I; Provisional), GT4_PimA-like (cd03801), RVT-CRISPR, nirV (LOAD_nirV)

Seq: QEST01000151.1 Streptomyces sp. PT12 NODE_60_length_27692_cov_331.152_ID_11540540, whole genome shotgun sequence (27692 bp)
Overview 1 RT 1: 24196-27318 bp Neighborhood of RT #1 [24196, 27452] YjgF_YER057c_UK114_family DDE_Tnp_ISL3 RVT-GII GIIM Feature: gene Location: 24196-24609 bp Feature: domain Description: YjgF_YER057c_UK114_family Location: 24265-24601 bp Feature: domain Description: YjgF_YER057c_UK114 _family Location: 24 265-24 601 bp Feature: gene Location: 24738-25442 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 25122-25380 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 25122-25380 bp Feature: gene Location: 26067-27452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26331-27018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26331-27018 bp Feature: domain Description: GIIM Note: maturase Location: 27090-27318 bp Feature: domain Description: GIIM Note: maturase Location: 27090-27318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjgF_YER057c_UK114_family (cl10015), DDE_Tnp_ISL3 (pfam01610), RVT-GII, GIIM (pfam08388)