myRT

myRT report for GCA_003311655.1_ASM331165v1

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Seq: QEQT01000091.1 Prauserella sp. PE36 1009, whole genome shotgun sequence (73293 bp)
Overview 1 RT 1: 22609-30083 bp Neighborhood of RT #1 [22609, 30136] GloA GloA Excalibur RVT-GII GIIM HATPase_c_2 STAS_anti-anti-sigma_factors Feature: gene Location: 22609-23535 bp Feature: domain Description: GloA Location: 22651-23062 bp Feature: domain Description: GloA Location: 22651 -23062 bp Feature: domain Description: GloA Location: 23095-23521 bp Feature: domain Description: GloA Location: 23095-23521 bp Feature: gene Location: 23797-24759 bp Feature: domain Description: Excalibur Location: 24706-24754 bp Feature: domain Description: Excalibur Location: 24706-24754 bp Feature: gene Location: 25995-27479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26337-27027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26337-27027 bp Feature: domain Description: GIIM Note: maturase Location: 27096-27306 bp Feature: domain Description: GIIM Note: maturase Location: 27096-27306 bp Feature: gene Location: 29013-29441 bp Feature: domain Description: HATPase_c_2 Location: 29094-29412 bp Feature: domain Description: HATPase_c_2 Location: 29094-2941 2 bp Feature: gene Location: 29723-30136 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 29801-30083 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 29801 -30083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GloA (COG0346), Excalibur (smart00894), RVT-GII, GIIM (pfam08388), HATPase_c_2 (pfam13581), STAS_anti-anti-sigma_factors (cd07043)

Seq: QEQT01000041.1 Prauserella sp. PE36 957, whole genome shotgun sequence (241982 bp)
Overview 1 RT 1: 211201-214398 bp Neighborhood of RT #1 [211201, 214398] YfmG RVT-CRISPR-like QueC Feature: gene Location: 211201-211662 bp Feature: gene Location: 211659-212216 bp Feature: domain Description: YfmG Location: 211785-212211 bp Feature: domain Description: YfmG Location: 2 11785-2 12 2 11 bp Feature: gene Location: 212222-213001 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 212423-212960 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 12 42 3-2 12 960 bp Feature: gene Location: 213203-213907 bp Feature: domain Description: QueC Location: 213239-213899 bp Feature: domain Description: QueC Location: 2 132 39-2 13899 bp Feature: gene Location: 213910-214398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-CRISPR, QueC (pfam06508)

Seq: QEQT01000051.1 Prauserella sp. PE36 967, whole genome shotgun sequence (49614 bp)
Overview 1 RT 1: 45312-49327 bp Neighborhood of RT #1 [45312, 49452] PRK07396 Transposase_mut RVT-GII GIIM Feature: gene Location: 45312-45761 bp Feature: domain Description: PRK07396 Location: 45321-45753 bp Feature: domain Description: PRK073 96 Location: 453 21-45753 bp Feature: gene Location: 46588-47502 bp Feature: domain Description: Transposase_mut Location: 46648-47428 bp Feature: domain Description: Transposase_mut Location: 46648-47428 bp Feature: gene Location: 47956-49452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48340-49021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483 40-49021 bp Feature: domain Description: GIIM Note: maturase Location: 49093-49327 bp Feature: domain Description: GIIM Note: maturase Location: 49093 -493 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07396 (dihydroxynaphthoic acid synthetase; Validated), Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388)

Seq: QEQT01000077.1 Prauserella sp. PE36 994, whole genome shotgun sequence (5578 bp)
Overview 1 RT 1: 633-4345 bp Neighborhood of RT #1 [633, 4389] InsE COG3464 RVT-GII TauC TauB Feature: gene Location: 633-866 bp Feature: domain Description: InsE Location: 642-858 bp Feature: domain Description: InsE Location: 64 2-858 bp Feature: gene Location: 1053-1973 bp Feature: domain Description: COG3464 Location: 1599-1968 bp Feature: domain Description: COG34 64 Location: 1599-1968 bp Feature: gene Location: 1978-2541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2314-2452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2314 -24 52 bp Feature: gene Location: 2666-3520 bp Feature: domain Description: TauC Location: 2756-3500 bp Feature: domain Description: TauC Location: 2756-3500 bp Feature: gene Location: 3517-4389 bp Feature: domain Description: TauB Location: 3604-4345 bp Feature: domain Description: TauB Location: 3604 -4 34 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), COG3464 (Transposase ), RVT-GII, TauC (COG0600), TauB (COG4525)

Seq: QEQT01000079.1 Prauserella sp. PE36 996, whole genome shotgun sequence (90403 bp)
Overview 1 RT 1: 25860-29089 bp Neighborhood of RT #1 [25860, 29089] QueC RVT-CRISPR-like pfam03781 Feature: gene Location: 25860-26342 bp Feature: gene Location: 26390-27049 bp Feature: domain Description: QueC Location: 26396-27041 bp Feature: domain Description: QueC Location: 26396-27041 bp Feature: gene Location: 27264-28043 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 27468-28002 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 27468-28002 bp Feature: gene Location: 28047-28604 bp Feature: domain Description: pfam03781 Location: 28191-28596 bp Feature: domain Description: pfam03781 Location: 28191-285 96 bp Feature: gene Location: 28601-29089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT QueC (pfam06508), RVT-CRISPR, pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)