myRT

myRT report for GCA_003312975.1_ASM331297v1

Download annotations/find similar RTs

Seq: PPSP01000002.1 Escherichia coli strain DLL7531 NODE2, whole genome shotgun sequence (237282 bp)
Overview 1 RT 1: 197989-201740 bp Neighborhood of RT #1 [197989, 201949] DinI RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 197989-198222 bp Feature: domain Description: DinI Location: 198031-198217 bp Feature: domain Description: DinI Location: 1 98031 -1 9821 7 bp Feature: gene Location: 198390-198524 bp Feature: gene Location: 198700-199635 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 198802-199396 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 98802-1 99396 bp Feature: gene Location: 199635-201269 bp Feature: domain Description: COG3950 Location: 199773-201231 bp Feature: domain Description: COG3950 Location: 1 99773-201 231 bp Feature: gene Location: 201389-201949 bp Feature: domain Description: TIGR02646 Location: 201392-201740 bp Feature: domain Description: TIGR02646 Location: 201 392-201 740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: PPSP01000065.1 Escherichia coli strain DLL7531 NODE65, whole genome shotgun sequence (18148 bp)
Overview 1 RT 1: 8416-12111 bp Neighborhood of RT #1 [8416, 12176] COG2085 PHA02517 RVT-GII GIIM InsE PHA02517 Feature: gene Location: 8416-8829 bp Feature: domain Description: COG2085 Location: 8515-8662 bp Feature: domain Description: COG2 085 Location: 8515-8662 bp Feature: gene Location: 8995-9159 bp Feature: domain Description: PHA02517 Location: 8998-9088 bp Feature: domain Description: PHA02 517 Location: 8998-9088 bp Feature: gene Location: 9324-10847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9597-10329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9597-1032 9 bp Feature: domain Description: GIIM Note: maturase Location: 10404-10602 bp Feature: domain Description: GIIM Note: maturase Location: 10404-10602 bp Feature: gene Location: 10801-11226 bp Feature: gene Location: 11439-12176 bp Feature: domain Description: InsE Location: 11451-11703 bp Feature: domain Description: InsE Location: 11451-11703 bp Feature: domain Description: PHA02517 Location: 11775-12111 bp Feature: domain Description: PHA02 517 Location: 11775-12 111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), COG2085 (Predicted dinucleotide-binding enzyme ), RVT-GII, GIIM (pfam08388)