myRT

myRT report for GCA_003313325.1_ASM331332v1

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Seq: QMHQ01000003.1 Pedobacter namyangjuensis strain 5G38 contig3, whole genome shotgun sequence (890407 bp)
Overview 1 RT 1: 367318-376057 bp Neighborhood of RT #1 [367318, 376080] McrBC AAA PRK11331 PRK11331 RVT-UG2 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like HsdM Feature: gene Location: 367318-368565 bp Feature: domain Description: McrBC Location: 367477-368401 bp Feature: domain Description: McrBC Location: 367477-368401 bp Feature: gene Location: 368558-371299 bp Feature: domain Description: AAA Location: 369989-370025 bp Feature: domain Description: AAA Location: 369989-370025 bp Feature: domain Description: PRK11331 Location: 370139-370283 bp Feature: domain Description: PRK1 1 331 Location: 3701 39-370283 bp Feature: domain Description: PRK11331 Location: 370577-371114 bp Feature: domain Description: PRK1 1 331 Location: 370577-371 1 1 4 bp Feature: gene Location: 371349-372899 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 371583-372522 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 371 583-372522 bp Feature: gene Location: 373275-374603 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 373281-373860 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 373281 -373860 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 373962-374505 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 373962-374505 bp Feature: gene Location: 374590-376080 bp Feature: domain Description: HsdM Location: 374635-376057 bp Feature: domain Description: HsdM Location: 374635-376057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrBC (pfam10117), AAA (TIGR00769), PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional), RVT-UG2, RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdM (COG0286)