myRT

myRT report for GCA_003317055.1_ASM331705v1

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Seq: QNRX01000005.1 Alkalibaculum bacchi strain DSM 22112 Ga0244545_105, whole genome shotgun sequence (186831 bp)
Overview 1 RT 1: 134119-138985 bp 2 RT 2: 173816-180813 bp Neighborhood of RT #1 [134119, 139050] RVT-GII GIIM HTH_LUXR MalT Neighborhood of RT #2 [173816, 181247] HTH_MerR-like recQ HTH_40 RVT-GII GIIM FrnE DUF3307 Feature: gene Location: 134119-134703 bp Feature: gene Location: 135075-135977 bp Feature: gene Location: 136192-137604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136543-137164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36543-1 371 64 bp Feature: domain Description: GIIM Note: maturase Location: 137218-137446 bp Feature: domain Description: GIIM Note: maturase Location: 1 3721 8-1 37446 bp Feature: gene Location: 138102-138359 bp Feature: domain Description: HTH_LUXR Location: 138180-138336 bp Feature: domain Description: HTH_LUXR Location: 1 381 80-1 38336 bp Feature: gene Location: 138442-139050 bp Feature: domain Description: MalT Location: 138484-138985 bp Feature: domain Description: MalT Location: 1 38484-1 38985 bp Feature: gene Location: 173816-174634 bp Feature: domain Description: HTH_MerR-like Location: 173828-174107 bp Feature: domain Description: HTH_MerR-like Location: 1 73828-1 741 07 bp Feature: gene Location: 174906-177068 bp Feature: domain Description: recQ Location: 174930-176706 bp Feature: domain Description: recQ Location: 1 74930-1 76706 bp Feature: domain Description: HTH_40 Location: 176787-177048 bp Feature: domain Description: HTH_40 Location: 1 76787-1 77048 bp Feature: gene Location: 177303-178544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177507-178164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 77507-1 781 64 bp Feature: domain Description: GIIM Note: maturase Location: 178242-178470 bp Feature: domain Description: GIIM Note: maturase Location: 1 78242-1 78470 bp Feature: gene Location: 179136-179852 bp Feature: domain Description: FrnE Location: 179139-179763 bp Feature: domain Description: FrnE Location: 1 791 39-1 79763 bp Feature: gene Location: 180459-181247 bp Feature: domain Description: DUF3307 Location: 180474-180813 bp Feature: domain Description: DUF3307 Location: 1 80474-1 8081 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_LUXR (smart00421), MalT (COG2909), HTH_MerR-like (cd00592), recQ (TIGR01389), HTH_40 (pfam14493), FrnE (COG2761), DUF3307 (pfam11750)

Seq: QNRX01000007.1 Alkalibaculum bacchi strain DSM 22112 Ga0244545_107, whole genome shotgun sequence (160253 bp)
Overview 1 RT 1: 80063-84314 bp Neighborhood of RT #1 [80063, 84319] fkbM_fam RVT-GII PBP2_OpuAC_like ProW Feature: gene Location: 80063-80851 bp Feature: domain Description: fkbM_fam Location: 80330-80711 bp Feature: domain Description: fkbM_fam Location: 80330-80711 bp Feature: gene Location: 81110-81325 bp Feature: gene Location: 81481-81993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81781-81832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81781-81832 bp Feature: gene Location: 82579-83445 bp Feature: domain Description: PBP2_OpuAC_like Location: 82684-83443 bp Feature: domain Description: PBP2 _OpuAC_like Location: 82 684-83443 bp Feature: gene Location: 83498-84319 bp Feature: domain Description: ProW Location: 83507-84314 bp Feature: domain Description: ProW Location: 83507-84314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fkbM_fam (TIGR01444), RVT-GII, PBP2_OpuAC_like (cd13639), ProW (COG4176)