myRT

myRT report for GCA_003317165.1_ASM331716v1

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Seq: NFSH01000032.1 Escherichia coli strain CVAST1422 NODE_32_length_35523_cov_60.6486, whole genome shotgun sequence (35523 bp)
Overview 1 RT 1: 16463-20388 bp Neighborhood of RT #1 [16463, 20402] Transposase_20 InsG RVT-GII GIIM rve_2 Feature: gene Location: 16463-17236 bp Feature: domain Description: Transposase_20 Location: 16892-17138 bp Feature: domain Description: Transposase_20 Location: 1 6892-1 71 38 bp Feature: gene Location: 17240-17854 bp Feature: domain Description: InsG Location: 17243-17834 bp Feature: domain Description: InsG Location: 1 7243-1 7834 bp Feature: gene Location: 18241-19629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18571-19189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8571 -1 91 89 bp Feature: domain Description: GIIM Note: maturase Location: 19237-19468 bp Feature: domain Description: GIIM Note: maturase Location: 1 9237-1 9468 bp Feature: gene Location: 19857-20174 bp Feature: gene Location: 20250-20402 bp Feature: domain Description: rve_2 Location: 20280-20388 bp Feature: domain Description: rve_2 Location: 20280-20388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), InsG (COG3385), RVT-GII, GIIM (pfam08388), rve_2 (pfam13333)

Seq: NFSH01000033.1 Escherichia coli strain CVAST1422 NODE_33_length_34592_cov_71.693, whole genome shotgun sequence (34412 bp)
Overview 1 RT 1: 23829-32134 bp Neighborhood of RT #1 [23829, 32163] RVT-GII DDE_Tnp_IS66 HTH_23 InsE RVT-GII RVT-GII FHA_bHelix fil_hemag_20aa FHA_bHelix FHA_bHelix Feature: gene Location: 23829-24104 bp Feature: gene Location: 24300-24461 bp Feature: gene Location: 24543-25253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24744-25245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4744-2 52 45 bp Feature: gene Location: 25248-25667 bp Feature: gene Location: 25705-26094 bp Feature: domain Description: DDE_Tnp_IS66 Location: 25810-26053 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 5810-2 6053 bp Feature: gene Location: 27513-28163 bp Feature: domain Description: HTH_23 Location: 27564-27663 bp Feature: domain Description: HTH_2 3 Location: 2 7564-2 7663 bp Feature: domain Description: InsE Location: 27789-28140 bp Feature: domain Description: InsE Location: 2 7789-2 8140 bp Feature: gene Location: 28535-28738 bp Feature: gene Location: 29145-29519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29151-29322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9151-2 932 2 bp Feature: gene Location: 29535-30347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29808-30264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9808-302 64 bp Feature: gene Location: 30468-30671 bp Feature: gene Location: 30958-32163 bp Feature: domain Description: FHA_bHelix Location: 30976-31207 bp Feature: domain Description: FHA_bHelix Location: 30976-312 07 bp Feature: domain Description: fil_hemag_20aa Location: 31210-31330 bp Feature: domain Description: fil_hemag_2 0aa Location: 312 10-31330 bp Feature: domain Description: FHA_bHelix Location: 31441-31807 bp Feature: domain Description: FHA_bHelix Location: 31441-31807 bp Feature: domain Description: FHA_bHelix Location: 32026-32134 bp Feature: domain Description: FHA_bHelix Location: 32 02 6-32 134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050), HTH_23 (pfam13384), InsE (COG2963), FHA_bHelix (sd00046), fil_hemag_20aa (TIGR01731)

Seq: NFSH01000004.1 Escherichia coli strain CVAST1422 NODE_4_length_248688_cov_52.3525, whole genome shotgun sequence (248688 bp)
Overview 1 RT 1: 50129-54070 bp Neighborhood of RT #1 [50129, 54070] RVT-Retrons Feature: gene Location: 50129-50368 bp Feature: gene Location: 50675-50851 bp Feature: gene Location: 50924-52696 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51083-51701 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51083 -51701 bp Feature: gene Location: 52718-52885 bp Feature: gene Location: 52931-54070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons