myRT

myRT report for GCA_003317295.1_ASM331729v1

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Seq: NFSP01000111.1 Escherichia coli strain CVAST1162 NODE_111_length_2206_cov_244.892, whole genome shotgun sequence (2206 bp)
Overview 1 RT 1: 93-2203 bp Neighborhood of RT #1 [93, 2203] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFSP01000013.1 Escherichia coli strain CVAST1162 NODE_13_length_133327_cov_49.7802, whole genome shotgun sequence (133200 bp)
Overview 1 RT 1: 3-2817 bp Neighborhood of RT #1 [3, 2825] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 3-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255-333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 55-333 bp Feature: gene Location: 492-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-780 bp Feature: domain Description: GIIM Note: maturase Location: 828-1008 bp Feature: domain Description: GIIM Note: maturase Location: 82 8-1008 bp Feature: gene Location: 1335-1523 bp Feature: gene Location: 1563-2825 bp Feature: domain Description: YesM Location: 2076-2817 bp Feature: domain Description: YesM Location: 2 076-2 817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: NFSP01000006.1 Escherichia coli strain CVAST1162 NODE_6_length_177095_cov_48.5324, whole genome shotgun sequence (177095 bp)
Overview 1 RT 1: 137572-143603 bp Neighborhood of RT #1 [137572, 143603] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137572-138492 bp Feature: domain Description: AbiEii Location: 137614-138355 bp Feature: domain Description: AbiEii Location: 13 7614-13 83 55 bp Feature: gene Location: 138479-139282 bp Feature: domain Description: AbiEi_3_N Location: 138512-138773 bp Feature: domain Description: AbiEi_3 _N Location: 13 8512-13 8773 bp Feature: domain Description: AbiEi_3 Location: 138785-139241 bp Feature: domain Description: AbiEi_3 Location: 13 8785-13 9241 bp Feature: gene Location: 139577-142786 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140105-140594 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140105-140594 bp Feature: domain Description: nitrilase Location: 142100-142697 bp Feature: domain Description: nitrilase Location: 142100-142697 bp Feature: gene Location: 142947-143087 bp Feature: domain Description: Phage_ASH Location: 142974-143067 bp Feature: domain Description: Phage_ASH Location: 142974-143 067 bp Feature: gene Location: 143133-143603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: NFSP01000070.1 Escherichia coli strain CVAST1162 NODE_70_length_12067_cov_50.0822, whole genome shotgun sequence (12067 bp)
Overview 1 RT 1: 10142-12027 bp Neighborhood of RT #1 [10142, 12065] Asparaginase_2 RVT-GII Feature: gene Location: 10142-11173 bp Feature: domain Description: Asparaginase_2 Location: 10232-11165 bp Feature: domain Description: Asparaginase_2 Location: 10232-11165 bp Feature: gene Location: 11500-11649 bp Feature: gene Location: 11697-12065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11925-12027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11925-12027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII