myRT

myRT report for GCA_003317335.1_ASM331733v1

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Seq: NFSQ01000102.1 Escherichia coli strain CVAST2506 NODE_102_length_2206_cov_319.657, whole genome shotgun sequence (2206 bp)
Overview 1 RT 1: 93-2203 bp Neighborhood of RT #1 [93, 2203] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFSQ01000065.1 Escherichia coli strain CVAST2506 NODE_65_length_12067_cov_59.949, whole genome shotgun sequence (12067 bp)
Overview 1 RT 1: 10142-12027 bp Neighborhood of RT #1 [10142, 12065] Asparaginase_2 RVT-GII Feature: gene Location: 10142-11173 bp Feature: domain Description: Asparaginase_2 Location: 10232-11165 bp Feature: domain Description: Asparaginase_2 Location: 102 32 -11165 bp Feature: gene Location: 11500-11649 bp Feature: gene Location: 11697-12065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11925-12027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1192 5-12 02 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII

Seq: NFSQ01000076.1 Escherichia coli strain CVAST2506 NODE_76_length_8508_cov_61.9994, whole genome shotgun sequence (8508 bp)
Overview 1 RT 1: 3-2817 bp Neighborhood of RT #1 [3, 2825] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 3-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255-333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255-3 3 3 bp Feature: gene Location: 492-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-780 bp Feature: domain Description: GIIM Note: maturase Location: 828-1008 bp Feature: domain Description: GIIM Note: maturase Location: 828-1008 bp Feature: gene Location: 1335-1523 bp Feature: gene Location: 1563-2825 bp Feature: domain Description: YesM Location: 2076-2817 bp Feature: domain Description: YesM Location: 2076-2817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: NFSQ01000008.1 Escherichia coli strain CVAST2506 NODE_8_length_157349_cov_62.7745, whole genome shotgun sequence (157230 bp)
Overview 1 RT 1: 33141-39384 bp Neighborhood of RT #1 [33141, 39521] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 33141-33407 bp Feature: domain Description: Phage_integrase Location: 33207-33303 bp Feature: domain Description: Phage_integrase Location: 33207-33303 bp Feature: gene Location: 33490-33960 bp Feature: gene Location: 34307-37516 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 34835-35324 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 34 835-35324 bp Feature: domain Description: nitrilase Location: 36830-37427 bp Feature: domain Description: nitrilase Location: 36830-374 27 bp Feature: gene Location: 37811-38614 bp Feature: domain Description: AbiEi_3_N Location: 37844-38105 bp Feature: domain Description: AbiEi_3_N Location: 3784 4 -38105 bp Feature: domain Description: AbiEi_3 Location: 38117-38573 bp Feature: domain Description: AbiEi_3 Location: 38117-38573 bp Feature: gene Location: 38601-39521 bp Feature: domain Description: AbiEii Location: 38643-39384 bp Feature: domain Description: AbiEii Location: 3864 3-39384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)