myRT

myRT report for GCA_003318155.1_ASM331815v1

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Seq: QOCE01000045.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_26, whole genome shotgun sequence (253891 bp)
Overview 1 RT 1: 195697-199298 bp Neighborhood of RT #1 [195697, 199975] RVT-Retrons PinE Feature: gene Location: 195697-196527 bp Feature: gene Location: 196588-196857 bp Feature: gene Location: 196958-198175 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 197294-197918 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 97294-1 9791 8 bp Feature: gene Location: 198354-198734 bp Feature: gene Location: 198734-199975 bp Feature: domain Description: PinE Location: 198752-199298 bp Feature: domain Description: PinE Location: 1 98752-1 99298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PinE (COG1961)

Seq: QOCE01000017.1 Phaeobacter gallaeciensis strain C3M10 C3M10_contig_37, whole genome shotgun sequence (130770 bp)
Overview 1 RT 1: 102740-108349 bp Neighborhood of RT #1 [102740, 108349] rimI PIN_GNAT-like COG4933 RVT-Retrons Trypsin_2 Feature: gene Location: 102740-104851 bp Feature: domain Description: rimI Location: 102833-103133 bp Feature: domain Description: rimI Location: 102 833-103133 bp Feature: domain Description: PIN_GNAT-like Location: 103277-103697 bp Feature: domain Description: PIN_GNAT-like Location: 1032 77-103697 bp Feature: gene Location: 104862-105275 bp Feature: domain Description: COG4933 Location: 104868-105201 bp Feature: domain Description: COG4933 Location: 104868-1052 01 bp Feature: gene Location: 105609-107225 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105666-106311 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105666-106311 bp Feature: domain Description: Trypsin_2 Location: 106689-107124 bp Feature: domain Description: Trypsin_2 Location: 106689-10712 4 bp Feature: gene Location: 107298-107507 bp Feature: gene Location: 107582-108349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rimI (TIGR01575), PIN_GNAT-like (cd18700), COG4933 (Predicted transcriptional regulator, contains an HTH and PUA-like domains ), RVT-Retrons, Trypsin_2 (pfam13365)