myRT

myRT report for GCA_003318185.1_ASM331818v1

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Seq: QOCC01000025.1 Tenacibaculum sp. E3R01 E3R01_contig_2, whole genome shotgun sequence (517838 bp)
Overview 1 RT 1: 246259-251391 bp Neighborhood of RT #1 [246259, 251391] VirE_N RVT-UG28b Feature: gene Location: 246259-246423 bp Feature: gene Location: 246854-247816 bp Feature: domain Description: VirE_N Location: 247013-247367 bp Feature: domain Description: VirE_N Location: 24701 3-247367 bp Feature: gene Location: 247925-249850 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 248543-249242 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 248543-249242 bp Feature: gene Location: 250039-250257 bp Feature: gene Location: 251089-251391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirE_N (pfam08800), RVT-UG28b

Seq: QOCC01000014.1 Tenacibaculum sp. E3R01 E3R01_contig_4, whole genome shotgun sequence (203785 bp)
Overview 1 RT 1: 174560-184294 bp Neighborhood of RT #1 [174560, 184791] PRK09426 ArgK MM_CoA_mutase_1 integrase_gron integrase_gron RVT-UG5 nitrilase COG3183 DUF2695 Feature: gene Location: 174560-178018 bp Feature: domain Description: PRK09426 Location: 174623-174962 bp Feature: domain Description: PRK0942 6 Location: 17462 3-174962 bp Feature: domain Description: ArgK Location: 175049-175877 bp Feature: domain Description: ArgK Location: 175049-175877 bp Feature: domain Description: MM_CoA_mutase_1 Location: 176147-177782 bp Feature: domain Description: MM_CoA_mutase_1 Location: 176147-177782 bp Feature: gene Location: 178183-179376 bp Feature: domain Description: integrase_gron Location: 178495-179026 bp Feature: domain Description: integrase_gron Location: 178495-17902 6 bp Feature: domain Description: integrase_gron Location: 179080-179305 bp Feature: domain Description: integrase_gron Location: 179080-179305 bp Feature: gene Location: 179452-182775 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 180007-180553 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 180007-180553 bp Feature: domain Description: nitrilase Location: 182020-182677 bp Feature: domain Description: nitrilase Location: 182 02 0-182 677 bp Feature: gene Location: 183007-183954 bp Feature: domain Description: COG3183 Location: 183235-183949 bp Feature: domain Description: COG3183 Location: 1832 35-183949 bp Feature: gene Location: 184102-184791 bp Feature: domain Description: DUF2695 Location: 184144-184294 bp Feature: domain Description: DUF2 695 Location: 184144-1842 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09426 (methylmalonyl-CoA mutase; Reviewed), ArgK (pfam03308), MM_CoA_mutase_1 (cd03678), integrase_gron (TIGR02249), RVT-UG5, nitrilase (cl11424), COG3183 (Predicted restriction endonuclease, HNH family ), DUF2695 (pfam10905)