myRT

myRT report for GCA_003321595.1_ASM332159v1

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Seq: PUQI01000004.1 Escherichia coli strain KOS_SF06_1605_Eco_101 EC-BIM101-S27-VE-xxx-2016-033-PK_S24_156, whole genome shotgun sequence (268046 bp)
Overview 1 RT 1: 176-9079 bp Neighborhood of RT #1 [176, 9081] Ail_Lom phage_tail_N 7tmA_amine_R-like Peptidase_S74 APC_N_CC RVT-UG17 SLATT_5 prfC Feature: gene Location: 176-775 bp Feature: domain Description: Ail_Lom Location: 179-773 bp Feature: domain Description: Ail_Lom Location: 1 79-773 bp Feature: gene Location: 840-4616 bp Feature: domain Description: phage_tail_N Location: 843-1242 bp Feature: domain Description: phage_tail_N Location: 843-1 242 bp Feature: domain Description: 7tmA_amine_R-like Location: 1656-3036 bp Feature: domain Description: 7tmA_amine_R-like Location: 1 656-3036 bp Feature: domain Description: Peptidase_S74 Location: 4185-4332 bp Feature: domain Description: Peptidase_S74 Location: 41 85-4332 bp Feature: domain Description: APC_N_CC Location: 4485-4608 bp Feature: domain Description: APC_N_CC Location: 4485-4608 bp Feature: gene Location: 4912-6282 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5140-5746 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 51 40-5746 bp Feature: gene Location: 6260-6964 bp Feature: domain Description: SLATT_5 Location: 6422-6932 bp Feature: domain Description: SLATT_5 Location: 6422-6932 bp Feature: gene Location: 7495-9081 bp Feature: domain Description: prfC Location: 7513-9079 bp Feature: domain Description: prfC Location: 751 3-9079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ail_Lom (pfam06316), phage_tail_N (pfam08400), 7tmA_amine_R-like (cd14967), Peptidase_S74 (pfam13884), APC_N_CC (pfam16689), RVT-UG17, SLATT_5 (pfam18160), prfC (TIGR00503)

Seq: PUQI01000043.1 Escherichia coli strain KOS_SF06_1605_Eco_101 EC-BIM101-S27-VE-xxx-2016-033-PK_S24_195, whole genome shotgun sequence (17596 bp)
Overview 1 RT 1: 4905-7794 bp Neighborhood of RT #1 [4905, 7794] RVT-GII GIIM RVT-GII Feature: gene Location: 4905-5123 bp Feature: gene Location: 5166-5336 bp Feature: gene Location: 5499-6152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5502-5910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5502 -5910 bp Feature: domain Description: GIIM Note: maturase Location: 5958-6150 bp Feature: domain Description: GIIM Note: maturase Location: 5958-6150 bp Feature: gene Location: 6125-6559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6317-6533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6317-6533 bp Feature: gene Location: 6728-6925 bp Feature: gene Location: 7468-7794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)