myRT

myRT report for GCA_003321935.1_ASM332193v1

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Seq: PURJ01000011.1 Escherichia coli strain GER_MD02_1511_Eco_064 EC-BIM064-64-VE-DEU-2015-033-PK_S70_149, whole genome shotgun sequence (156786 bp)
Overview 1 RT 1: 141580-145673 bp Neighborhood of RT #1 [141580, 145738] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 141580-142626 bp Feature: domain Description: COG3547 Location: 141589-142510 bp Feature: domain Description: COG3547 Location: 1 41 589-1 4251 0 bp Feature: gene Location: 142905-143111 bp Feature: gene Location: 143198-144721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143471-144203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 43471 -1 44203 bp Feature: domain Description: GIIM Note: maturase Location: 144278-144476 bp Feature: domain Description: GIIM Note: maturase Location: 1 44278-1 44476 bp Feature: gene Location: 144675-145100 bp Feature: gene Location: 145313-145738 bp Feature: domain Description: PHA02517 Location: 145337-145673 bp Feature: domain Description: PHA0251 7 Location: 1 45337-1 45673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PURJ01000030.1 Escherichia coli strain GER_MD02_1511_Eco_064 EC-BIM064-64-VE-DEU-2015-033-PK_S70_168, whole genome shotgun sequence (47174 bp)
Overview 1 RT 1: 21909-25792 bp Neighborhood of RT #1 [21909, 25797] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 21909-22625 bp Feature: domain Description: rph Location: 21912-22620 bp Feature: domain Description: rph Location: 2 1912 -2 2 62 0 bp Feature: gene Location: 22677-23333 bp Feature: domain Description: pyrE Location: 22695-23328 bp Feature: domain Description: pyrE Location: 2 2 695-2 332 8 bp Feature: gene Location: 23631-24590 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23766-24315 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3766-2 4315 bp Feature: gene Location: 24636-25232 bp Feature: domain Description: slmA Location: 24642-25218 bp Feature: domain Description: slmA Location: 2 4642 -2 52 18 bp Feature: gene Location: 25339-25797 bp Feature: domain Description: dut Location: 25345-25792 bp Feature: domain Description: dut Location: 2 5345-2 5792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)