myRT

myRT report for GCA_003321995.1_ASM332199v1

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Seq: PURK01000012.1 Escherichia coli strain GER_MD14_1511_Eco_063 EC-BIM063-63-VE-DEU-2015-033-PK_S69_169, whole genome shotgun sequence (139656 bp)
Overview 1 RT 1: 50856-54738 bp Neighborhood of RT #1 [50856, 54743] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 50856-51314 bp Feature: domain Description: dut Location: 50862-51309 bp Feature: domain Description: dut Location: 50862-51 309 bp Feature: gene Location: 51421-52017 bp Feature: domain Description: slmA Location: 51427-52003 bp Feature: domain Description: slmA Location: 51 427-52003 bp Feature: gene Location: 52063-53022 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52198-52747 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 521 98-52747 bp Feature: gene Location: 53320-53976 bp Feature: domain Description: pyrE Location: 53338-53971 bp Feature: domain Description: pyrE Location: 53338-53971 bp Feature: gene Location: 54027-54743 bp Feature: domain Description: rph Location: 54030-54738 bp Feature: domain Description: rph Location: 54030-54738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: PURK01000023.1 Escherichia coli strain GER_MD14_1511_Eco_063 EC-BIM063-63-VE-DEU-2015-033-PK_S69_180, whole genome shotgun sequence (38446 bp)
Overview 1 RT 1: 10174-15991 bp Neighborhood of RT #1 [10174, 16014] PRK09678 RVT-UG3 RVT-UG8 PBP2_CrgA_like_5 XdhC Feature: gene Location: 10174-10446 bp Feature: domain Description: PRK09678 Location: 10183-10348 bp Feature: domain Description: PRK09678 Location: 10183-10348 bp Feature: gene Location: 10594-10794 bp Feature: gene Location: 10841-12118 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 11129-11624 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1112 9-1162 4 bp Feature: gene Location: 12109-14127 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12682-13135 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12 682 -13135 bp Feature: gene Location: 14669-15079 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 14741-15053 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 14741-15053 bp Feature: gene Location: 15058-16014 bp Feature: domain Description: XdhC Location: 15136-15991 bp Feature: domain Description: XdhC Location: 15136-15991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PBP2_CrgA_like_5 (cd08474), XdhC (COG1975)

Seq: PURK01000071.1 Escherichia coli strain GER_MD14_1511_Eco_063 EC-BIM063-63-VE-DEU-2015-033-PK_S69_228, whole genome shotgun sequence (2159 bp)
Overview 1 RT 1: 1-1983 bp Neighborhood of RT #1 [1, 2021] PRK15434 RVT-GII IS285 Feature: gene Location: 1-219 bp Feature: domain Description: PRK15434 Location: 4-199 bp Feature: domain Description: PRK1543 4 Location: 4-199 bp Feature: gene Location: 639-860 bp Feature: gene Location: 921-1214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092-1197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092-1197 bp Feature: gene Location: 1263-2021 bp Feature: domain Description: IS285 Location: 1293-1983 bp Feature: domain Description: IS285 Location: 1293 -1983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15434 (GDP-mannose mannosyl hydrolase), RVT-GII, IS285 (COG3328)