myRT

myRT report for GCA_003322415.1_ASM332241v1

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Seq: PUSR01000053.1 Escherichia coli strain GER_MD11_1505_Eco_027 EC-BIM027-27-VE-DEU-2015-033-PK_S3_159, whole genome shotgun sequence (8904 bp)
Overview 1 RT 1: 1039-8903 bp Neighborhood of RT #1 [1039, 8902] PAAR_2 RhsA RHS_repeat RhsA RhsA RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 1039-5259 bp Feature: domain Description: PAAR_2 Location: 1045-1126 bp Feature: domain Description: PAAR_2 Location: 1 045-1 1 26 bp Feature: domain Description: RhsA Location: 1624-2071 bp Feature: domain Description: RhsA Location: 1 624-2071 bp Feature: domain Description: RHS_repeat Location: 2134-2224 bp Feature: domain Description: RHS_repeat Location: 21 34-2224 bp Feature: domain Description: RhsA Location: 2293-2629 bp Feature: domain Description: RhsA Location: 2293-2629 bp Feature: domain Description: RhsA Location: 2656-4825 bp Feature: domain Description: RhsA Location: 2656-4825 bp Feature: gene Location: 6273-6647 bp Feature: gene Location: 6996-8495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7449-8106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7449-81 06 bp Feature: domain Description: GIIM Note: maturase Location: 8190-8400 bp Feature: domain Description: GIIM Note: maturase Location: 81 90-8400 bp Feature: gene Location: 8702-8902 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 8723-8903 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 8723-8903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)