myRT

myRT report for GCA_003322525.1_ASM332252v1

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Seq: PUSY01000024.1 Escherichia coli strain GER_MD08_1505_Eco_019 EC-BIM019-19-VE-DEU-2015-033-PK_261, whole genome shotgun sequence (70471 bp)
Overview 1 RT 1: 49149-53031 bp Neighborhood of RT #1 [49149, 53036] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49149-49607 bp Feature: domain Description: dut Location: 49155-49602 bp Feature: domain Description: dut Location: 491 55-49602 bp Feature: gene Location: 49714-50310 bp Feature: domain Description: slmA Location: 49720-50296 bp Feature: domain Description: slmA Location: 49720-50296 bp Feature: gene Location: 50356-51315 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50491-51040 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50491 -51 040 bp Feature: gene Location: 51613-52269 bp Feature: domain Description: pyrE Location: 51631-52264 bp Feature: domain Description: pyrE Location: 51 631 -52264 bp Feature: gene Location: 52320-53036 bp Feature: domain Description: rph Location: 52323-53031 bp Feature: domain Description: rph Location: 52323-53031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: PUSY01000065.1 Escherichia coli strain GER_MD08_1505_Eco_019 EC-BIM019-19-VE-DEU-2015-033-PK_302, whole genome shotgun sequence (8829 bp)
Overview 1 RT 1: 5478-8586 bp Neighborhood of RT #1 [5478, 8651] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5478-5777 bp Feature: gene Location: 5761-6207 bp Feature: domain Description: PHA02517 Location: 5764-6205 bp Feature: domain Description: PHA02 517 Location: 5764-62 05 bp Feature: gene Location: 6324-7847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6597-7329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6597-732 9 bp Feature: domain Description: GIIM Note: maturase Location: 7404-7602 bp Feature: domain Description: GIIM Note: maturase Location: 7404-7602 bp Feature: gene Location: 7801-8226 bp Feature: gene Location: 8439-8651 bp Feature: domain Description: PHA02517 Location: 8442-8586 bp Feature: domain Description: PHA02 517 Location: 8442 -8586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)