myRT

myRT report for GCA_003323185.1_ASM332318v1

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Seq: PUST01000030.1 Escherichia coli strain GER_MD11_1505_Eco_025 EC-BIM025-25-VE-DEU-2015-033-PK_S1_200, whole genome shotgun sequence (52588 bp)
Overview 1 RT 1: 28145-32991 bp Neighborhood of RT #1 [28145, 32991] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 28145-29578 bp Feature: domain Description: DUF3987 Location: 28238-29315 bp Feature: domain Description: DUF3987 Location: 28238-2931 5 bp Feature: gene Location: 30437-31000 bp Feature: domain Description: Inovirus_Gp2 Location: 30494-30935 bp Feature: domain Description: Inovirus_Gp2 Location: 30494-30935 bp Feature: gene Location: 31326-32489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31440-32127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 440-321 27 bp Feature: gene Location: 32476-32784 bp Feature: gene Location: 32818-32991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII

Seq: PUST01000068.1 Escherichia coli strain GER_MD11_1505_Eco_025 EC-BIM025-25-VE-DEU-2015-033-PK_S1_238, whole genome shotgun sequence (6258 bp)
Overview 1 RT 1: 2-1887 bp Neighborhood of RT #1 [2, 1904] InsE RVT-GII RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 2-340 bp Feature: domain Description: InsE Location: 5-296 bp Feature: domain Description: InsE Location: 5-2 96 bp Feature: gene Location: 379-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 4-580 bp Feature: gene Location: 616-852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 619-799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 619-799 bp Feature: gene Location: 845-1123 bp Feature: gene Location: 1164-1904 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1188-1755 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1188-1755 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1776-1887 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1776-1887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)