myRT

myRT report for GCA_003323565.1_ASM332356v1

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Seq: QOJP01000022.1 Enterococcus faecium strain IHC24 ICH24_contig_118_consensus_1, whole genome shotgun sequence (16320 bp)
Overview 1 RT 1: 1898-7456 bp Neighborhood of RT #1 [1898, 7464] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 1898-3040 bp Feature: domain Description: Dcm Location: 1901-3014 bp Feature: domain Description: Dcm Location: 1 901 -301 4 bp Feature: gene Location: 3085-3465 bp Feature: domain Description: FtsK Location: 3100-3340 bp Feature: domain Description: FtsK Location: 31 00-3340 bp Feature: gene Location: 3567-5441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3933-4629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3933-4629 bp Feature: domain Description: HNHc Note: nucleases Location: 5169-5328 bp Feature: domain Description: HNHc Note: nucleases Location: 51 69-5328 bp Feature: gene Location: 6035-7066 bp Feature: domain Description: FtsK_SpoIIIE Location: 6707-6947 bp Feature: domain Description: FtsK_SpoIIIE Location: 6707-6947 bp Feature: gene Location: 7120-7464 bp Feature: domain Description: RelB_DinJ Location: 7330-7456 bp Feature: domain Description: RelB_DinJ Location: 7330-7456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: QOJP01000120.1 Enterococcus faecium strain IHC24 ICH24_contig_206_consensus_1, whole genome shotgun sequence (16038 bp)
Overview 1 RT 1: 3249-10839 bp Neighborhood of RT #1 [3249, 10847] Zeta_toxin RVT-GII HNHc group_II_RT_mat HNHc RVT-GII FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 3249-3689 bp Feature: domain Description: Zeta_toxin Location: 3327-3684 bp Feature: domain Description: Zeta_toxin Location: 332 7-3684 bp Feature: gene Location: 3776-4018 bp Feature: gene Location: 4112-5971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4421-5162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442 1-5162 bp Feature: domain Description: HNHc Note: nucleases Location: 5717-5855 bp Feature: domain Description: HNHc Note: nucleases Location: 5717-5855 bp Feature: gene Location: 6090-6320 bp Feature: gene Location: 6686-6844 bp Feature: gene Location: 6946-7752 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6958-7162 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6958-7162 bp Feature: domain Description: HNHc Note: nucleases Location: 7474-7639 bp Feature: domain Description: HNHc Note: nucleases Location: 7474-7639 bp Feature: gene Location: 7605-8819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7971-8670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7971-8670 bp Feature: gene Location: 9413-10450 bp Feature: domain Description: FtsK_SpoIIIE Location: 10085-10331 bp Feature: domain Description: FtsK_SpoIIIE Location: 10085-10331 bp Feature: gene Location: 10512-10847 bp Feature: domain Description: RelB_DinJ Location: 10716-10839 bp Feature: domain Description: RelB_DinJ Location: 10716-10839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zeta_toxin (pfam06414), RVT-GII, HNHc (smart00507), group_II_RT_mat (TIGR04416), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: QOJP01000126.1 Enterococcus faecium strain IHC24 ICH24_contig_211_consensus_1, whole genome shotgun sequence (3411 bp)
Overview 1 RT 1: 3-3389 bp Neighborhood of RT #1 [3, 3409] HsdM RVT-AbiP2 Tra8 Feature: gene Location: 3-1466 bp Feature: domain Description: HsdM Location: 24-1449 bp Feature: domain Description: HsdM Location: 24-1449 bp Feature: gene Location: 1804-3279 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2152-2617 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2152-2617 bp Feature: gene Location: 3257-3409 bp Feature: domain Description: Tra8 Location: 3260-3389 bp Feature: domain Description: Tra8 Location: 3 260-3 3 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2, Tra8 (COG2826)

Seq: QOJP01000337.1 Enterococcus faecium strain IHC24 ICH24_contig_75_consensus_1, whole genome shotgun sequence (3483 bp)
Overview 1 RT 1: 1-3157 bp Neighborhood of RT #1 [1, 3276] DEDD_Tnp_IS110 RVT-GII HNHc Feature: gene Location: 1-228 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 16-220 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 16-220 bp Feature: gene Location: 1366-3276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1699-2437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1699-24 37 bp Feature: domain Description: HNHc Note: nucleases Location: 2992-3157 bp Feature: domain Description: HNHc Note: nucleases Location: 2992-3157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), RVT-GII, HNHc (smart00507)