myRT

myRT report for GCA_003323665.1_ASM332366v1

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Seq: QOJR01000147.1 Enterococcus faecium strain IHC27 IHC27_contig_117_consensus_1, whole genome shotgun sequence (3257 bp)
Overview 1 RT 1: 1-2594 bp Neighborhood of RT #1 [1, 3256] HsdM RVT-AbiP2 Feature: gene Location: 1-1464 bp Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 22-1 447 bp Feature: gene Location: 1802-3256 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2129-2594 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 21 29-2594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: QOJR01000216.1 Enterococcus faecium strain IHC27 IHC27_contig_124_consensus_1, whole genome shotgun sequence (9313 bp)
Overview 1 RT 1: 435-6000 bp Neighborhood of RT #1 [435, 6005] RVT-GII HNHc RVT-GII HNHc Zeta_toxin Feature: gene Location: 435-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1500 bp Feature: gene Location: 1817-2308 bp Feature: domain Description: HNHc Note: nucleases Location: 2027-2195 bp Feature: domain Description: HNHc Note: nucleases Location: 2 02 7-2 195 bp Feature: gene Location: 2410-2568 bp Feature: gene Location: 2934-3164 bp Feature: gene Location: 3283-5142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3592-4333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3592 -4333 bp Feature: domain Description: HNHc Note: nucleases Location: 4888-5026 bp Feature: domain Description: HNHc Note: nucleases Location: 4888-502 6 bp Feature: gene Location: 5236-5478 bp Feature: gene Location: 5565-6005 bp Feature: domain Description: Zeta_toxin Location: 5643-6000 bp Feature: domain Description: Zeta_toxin Location: 5643-6000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Zeta_toxin (pfam06414)

Seq: QOJR01000186.1 Enterococcus faecium strain IHC27 IHC27_contig_125_consensus_1, whole genome shotgun sequence (5875 bp)
Overview 1 RT 1: 435-3952 bp Neighborhood of RT #1 [435, 3978] RVT-GII HNHc FtsK Dcm Feature: gene Location: 435-2309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1497 bp Feature: domain Description: HNHc Note: nucleases Location: 2037-2196 bp Feature: domain Description: HNHc Note: nucleases Location: 203 7-2196 bp Feature: gene Location: 2411-2791 bp Feature: domain Description: FtsK Location: 2426-2666 bp Feature: domain Description: FtsK Location: 2426-2666 bp Feature: gene Location: 2836-3978 bp Feature: domain Description: Dcm Location: 2839-3952 bp Feature: domain Description: Dcm Location: 283 9-3 952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: QOJR01000213.1 Enterococcus faecium strain IHC27 IHC27_contig_151_consensus_1, whole genome shotgun sequence (9089 bp)
Overview 1 RT 1: 5618-8250 bp Neighborhood of RT #1 [5618, 8369] ArdA RVT-GII HNHc Feature: gene Location: 5618-6118 bp Feature: domain Description: ArdA Location: 5636-6107 bp Feature: domain Description: ArdA Location: 5636-6107 bp Feature: gene Location: 6131-6283 bp Feature: gene Location: 6459-8369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6792-7530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6792-7530 bp Feature: domain Description: HNHc Note: nucleases Location: 8085-8250 bp Feature: domain Description: HNHc Note: nucleases Location: 8085-8250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507)