myRT

myRT report for GCA_003324095.1_ASM332409v1

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Seq: NFSI01000027.1 Escherichia coli strain CVAST2744 NODE_27_length_43792_cov_78.4105, whole genome shotgun sequence (43612 bp)
Overview 1 RT 1: 33029-41334 bp Neighborhood of RT #1 [33029, 41363] RVT-GII DDE_Tnp_IS66 HTH_23 InsE RVT-GII RVT-GII FHA_bHelix fil_hemag_20aa FHA_bHelix FHA_bHelix Feature: gene Location: 33029-33304 bp Feature: gene Location: 33500-33661 bp Feature: gene Location: 33743-34453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33944-34445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33944-34445 bp Feature: gene Location: 34448-34867 bp Feature: gene Location: 34905-35294 bp Feature: domain Description: DDE_Tnp_IS66 Location: 35010-35253 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3501 0-35253 bp Feature: gene Location: 36713-37363 bp Feature: domain Description: HTH_23 Location: 36764-36863 bp Feature: domain Description: HTH_23 Location: 36764-36863 bp Feature: domain Description: InsE Location: 36989-37340 bp Feature: domain Description: InsE Location: 36989-37340 bp Feature: gene Location: 37735-37938 bp Feature: gene Location: 38345-38719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38351-38522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38351 -38522 bp Feature: gene Location: 38735-39547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39008-39464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39008-39464 bp Feature: gene Location: 39668-39871 bp Feature: gene Location: 40158-41363 bp Feature: domain Description: FHA_bHelix Location: 40176-40407 bp Feature: domain Description: FHA_bHelix Location: 401 76-40407 bp Feature: domain Description: fil_hemag_20aa Location: 40410-40530 bp Feature: domain Description: fil_hemag_20aa Location: 4041 0-40530 bp Feature: domain Description: FHA_bHelix Location: 40641-41007 bp Feature: domain Description: FHA_bHelix Location: 40641 -41 007 bp Feature: domain Description: FHA_bHelix Location: 41226-41334 bp Feature: domain Description: FHA_bHelix Location: 41 226-41 334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050), HTH_23 (pfam13384), InsE (COG2963), FHA_bHelix (sd00046), fil_hemag_20aa (TIGR01731)

Seq: NFSI01000034.1 Escherichia coli strain CVAST2744 NODE_34_length_19915_cov_63.2582, whole genome shotgun sequence (19710 bp)
Overview 1 RT 1: 15122-18963 bp Neighborhood of RT #1 [15122, 19061] rve_2 RVT-GII GIIM InsG Transposase_20 Feature: gene Location: 15122-15274 bp Feature: domain Description: rve_2 Location: 15152-15260 bp Feature: domain Description: rve_2 Location: 15152 -152 60 bp Feature: gene Location: 15547-15852 bp Feature: gene Location: 15895-17283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16225-16843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 2 5-16843 bp Feature: domain Description: GIIM Note: maturase Location: 16891-17122 bp Feature: domain Description: GIIM Note: maturase Location: 16891-1712 2 bp Feature: gene Location: 17670-18284 bp Feature: domain Description: InsG Location: 17673-18264 bp Feature: domain Description: InsG Location: 17673-182 64 bp Feature: gene Location: 18300-19061 bp Feature: domain Description: Transposase_20 Location: 18717-18963 bp Feature: domain Description: Transposase_2 0 Location: 18717-18963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_2 (pfam13333), RVT-GII, GIIM (pfam08388), InsG (COG3385), Transposase_20 (pfam02371)

Seq: NFSI01000006.1 Escherichia coli strain CVAST2744 NODE_6_length_245758_cov_63.0228, whole genome shotgun sequence (245575 bp)
Overview 1 RT 1: 191506-195447 bp Neighborhood of RT #1 [191506, 195447] RVT-Retrons Feature: gene Location: 191506-192645 bp Feature: gene Location: 192691-192858 bp Feature: gene Location: 192880-194652 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 193039-193657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 193 03 9-193 657 bp Feature: gene Location: 194873-195016 bp Feature: gene Location: 195208-195447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons