myRT

myRT report for GCA_003324125.1_ASM332412v1

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Seq: PSQF01000004.1 Subdoligranulum sp. APC924/74 NODE_4_length_97128_cov_797.574, whole genome shotgun sequence (97128 bp)
Overview 1 RT 1: 89287-95404 bp Neighborhood of RT #1 [89287, 95427] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT-GII VirD4 DUF3801 Feature: gene Location: 89287-91167 bp Feature: domain Description: SR_TndX_transposase Location: 89311-89719 bp Feature: domain Description: SR_TndX_transposase Location: 8931 1 -8971 9 bp Feature: domain Description: Recombinase Location: 89818-90181 bp Feature: domain Description: Recombinase Location: 8981 8-901 81 bp Feature: domain Description: Zn_ribbon_recom Location: 90223-90406 bp Feature: domain Description: Zn_ribbon_recom Location: 90223-90406 bp Feature: domain Description: DUF4368 Location: 90691-90877 bp Feature: domain Description: DUF4368 Location: 90691 -90877 bp Feature: gene Location: 91240-91458 bp Feature: gene Location: 91615-93525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91945-92689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 945-92689 bp Feature: gene Location: 94151-94957 bp Feature: domain Description: VirD4 Location: 94367-94892 bp Feature: domain Description: VirD4 Location: 94367-94892 bp Feature: gene Location: 94954-95427 bp Feature: domain Description: DUF3801 Location: 95035-95404 bp Feature: domain Description: DUF3801 Location: 95035-95404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687)

Seq: PSQF01000009.1 Subdoligranulum sp. APC924/74 NODE_9_length_59027_cov_929.367, whole genome shotgun sequence (59027 bp)
Overview 1 RT 1: 10636-16414 bp Neighborhood of RT #1 [10636, 16536] ABC_trans_CmpB RVT-DGRs ABC_SMC4_euk Feature: gene Location: 10636-11067 bp Feature: domain Description: ABC_trans_CmpB Location: 10762-11002 bp Feature: domain Description: ABC_trans_CmpB Location: 10762 -11002 bp Feature: gene Location: 11051-11728 bp Feature: gene Location: 11728-13002 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12052-12643 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 052 -12 643 bp Feature: gene Location: 13344-15203 bp Feature: gene Location: 15217-16536 bp Feature: domain Description: ABC_SMC4_euk Location: 15598-16414 bp Feature: domain Description: ABC_SMC4_euk Location: 15598-16414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_trans_CmpB (pfam06541), RVT-DGRs, ABC_SMC4_euk (cd03274)