myRT

myRT report for GCA_003324295.1_ASM332429v1

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Seq: QMGO01000001.1 Pseudomonas aeruginosa strain AR_0456 AR_456.contig.0_1, whole genome shotgun sequence (7079305 bp)
Overview 1 RT 1: 4435911-4446101 bp Neighborhood of RT #1 [4435911, 4446103] RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 4435911-4436153 bp Feature: gene Location: 4436425-4437102 bp Feature: gene Location: 4437640-4439325 bp Feature: RT Description: RVT_N Location: 4437697-4437937 bp Feature: RT Description: RVT_N Location: 4437697-4437937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4437985-4438621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4437985-4438621 bp Feature: domain Description: GIIM Note: maturase Location: 4438675-4438906 bp Feature: domain Description: GIIM Note: maturase Location: 4438675-4438906 bp Feature: domain Description: HNH Note: nucleases Location: 4439158-4439296 bp Feature: domain Description: HNH Note: nucleases Location: 44391 58-4439296 bp Feature: gene Location: 4440406-4444143 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 4440514-4441171 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 444051 4-4441 1 71 bp Feature: domain Description: PRK09776 Location: 4441384-4441855 bp Feature: domain Description: PRK09776 Location: 4441 384-4441 855 bp Feature: domain Description: PAS Location: 4441915-4442437 bp Feature: domain Description: PAS Location: 4441 91 5-4442437 bp Feature: domain Description: PRK10060 Location: 4442446-4444093 bp Feature: domain Description: PRK1 0060 Location: 4442446-4444093 bp Feature: gene Location: 4444250-4446103 bp Feature: domain Description: PRK05658 Location: 4444262-4446101 bp Feature: domain Description: PRK05658 Location: 4444262-44461 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)