myRT

myRT report for GCA_003324505.1_ASM332450v1

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Seq: QMGK01000003.1 Escherichia coli strain AR_0433 AR_433.contig.2_1, whole genome shotgun sequence (4761984 bp)
Overview 1 RT 1: 823956-827176 bp 2 RT 2: 1263485-1266955 bp Neighborhood of RT #1 [823956, 827241] PHA02517 RVT-GII GIIM RVT-GII PHA02517 Neighborhood of RT #2 [1263485, 1267062] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 823956-824126 bp Feature: gene Location: 824154-824570 bp Feature: domain Description: PHA02517 Location: 824157-824562 bp Feature: domain Description: PHA0251 7 Location: 8241 57-824562 bp Feature: gene Location: 824693-825733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824699-825215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824699-82521 5 bp Feature: domain Description: GIIM Note: maturase Location: 825290-825488 bp Feature: domain Description: GIIM Note: maturase Location: 825290-825488 bp Feature: gene Location: 825775-826170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826048-826123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826048-8261 23 bp Feature: gene Location: 826124-826549 bp Feature: gene Location: 826762-827241 bp Feature: domain Description: PHA02517 Location: 826822-827176 bp Feature: domain Description: PHA0251 7 Location: 826822-8271 76 bp Feature: gene Location: 1263485-1263787 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1263494-1263746 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 263494-1 263746 bp Feature: gene Location: 1263971-1264216 bp Feature: gene Location: 1264242-1265174 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1264344-1264938 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 264344-1 264938 bp Feature: gene Location: 1265176-1266162 bp Feature: gene Location: 1266790-1267062 bp Feature: domain Description: PRK09678 Location: 1266799-1266955 bp Feature: domain Description: PRK09678 Location: 1 266799-1 266955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)