myRT

myRT report for GCA_003327865.1_ASM332786v1

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Seq: QETX01000134.1 Escherichia coli strain E393 Scaffold134_1, whole genome shotgun sequence (2508 bp)
Overview 1 RT 1: 210-2442 bp Neighborhood of RT #1 [210, 2507] RVT-GII GIIM PHA02517 Feature: gene Location: 210-1733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1 21 5 bp Feature: domain Description: GIIM Note: maturase Location: 1290-1488 bp Feature: domain Description: GIIM Note: maturase Location: 1 290-1 488 bp Feature: gene Location: 2325-2507 bp Feature: domain Description: PHA02517 Location: 2331-2442 bp Feature: domain Description: PHA0251 7 Location: 2331 -2442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: QETX01000027.1 Escherichia coli strain E393 Scaffold27_1, whole genome shotgun sequence (59258 bp)
Overview 1 RT 1: 14392-20769 bp Neighborhood of RT #1 [14392, 20789] XdhC PBP2_CrgA_like_5 RVT-UG8 PRK09678 Psu Feature: gene Location: 14392-15348 bp Feature: domain Description: XdhC Location: 14470-15325 bp Feature: domain Description: XdhC Location: 14470-1532 5 bp Feature: gene Location: 15327-15737 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 15399-15711 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 15399-15711 bp Feature: gene Location: 16279-18297 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 16852-17305 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 16852 -17305 bp Feature: gene Location: 19960-20232 bp Feature: domain Description: PRK09678 Location: 19969-20134 bp Feature: domain Description: PRK09678 Location: 19969-2 0134 bp Feature: gene Location: 20238-20789 bp Feature: domain Description: Psu Location: 20259-20769 bp Feature: domain Description: Psu Location: 2 02 59-2 0769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-UG8, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)

Seq: QETX01000093.1 Escherichia coli strain E393 Scaffold93_1, whole genome shotgun sequence (9366 bp)
Overview 1 RT 1: 3-4205 bp Neighborhood of RT #1 [3, 4205] PRK11447 RAYT RVT-GII GIIM Feature: gene Location: 3-1085 bp Feature: domain Description: PRK11447 Location: 6-1086 bp Feature: domain Description: PRK11447 Location: 6-1086 bp Feature: gene Location: 1432-2049 bp Feature: domain Description: RAYT Location: 1588-1951 bp Feature: domain Description: RAYT Location: 1588-1951 bp Feature: gene Location: 2124-3470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2412-3030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2412-3 03 0 bp Feature: domain Description: GIIM Note: maturase Location: 3078-3309 bp Feature: domain Description: GIIM Note: maturase Location: 3 078-3 3 09 bp Feature: gene Location: 3501-3698 bp Feature: gene Location: 4062-4205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11447 (cellulose synthase subunit BcsC; Provisional), RAYT (COG1943), RVT-GII, GIIM (pfam08388)