myRT

myRT report for GCA_003328085.1_ASM332808v1

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Seq: QETZ01000152.1 Escherichia coli strain E205 Scaffold150_1, whole genome shotgun sequence (1303 bp)
Overview 1 RT 1: 1-1095 bp Neighborhood of RT #1 [1, 1095] RVT_N RVT-GII Feature: gene Location: 1-633 bp Feature: domain Description: RVT_N Location: 49-286 bp Feature: domain Description: RVT_N Location: 49-286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-631 bp Feature: gene Location: 670-816 bp Feature: gene Location: 913-1095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: QETZ01000154.1 Escherichia coli strain E205 Scaffold152_1, whole genome shotgun sequence (1133 bp)
Overview 1 RT 1: 1-1006 bp Neighborhood of RT #1 [1, 1041] RVT-GII GIIM HNHc Feature: gene Location: 1-1041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-352 bp Feature: domain Description: GIIM Note: maturase Location: 403-637 bp Feature: domain Description: GIIM Note: maturase Location: 403-637 bp Feature: domain Description: HNHc Note: nucleases Location: 847-1006 bp Feature: domain Description: HNHc Note: nucleases Location: 847-1006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: QETZ01000034.1 Escherichia coli strain E205 Scaffold34_1, whole genome shotgun sequence (50011 bp)
Overview 1 RT 1: 222-2982 bp Neighborhood of RT #1 [222, 2987] RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 222-359 bp Feature: gene Location: 375-509 bp Feature: gene Location: 617-1987 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 845-1451 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 845-1451 bp Feature: gene Location: 1965-2516 bp Feature: domain Description: SLATT_5 Location: 1971-2487 bp Feature: domain Description: SLATT_5 Location: 1971-2487 bp Feature: gene Location: 2739-2987 bp Feature: domain Description: PRK10597 Location: 2742-2982 bp Feature: domain Description: PRK10597 Location: 2742-2982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)