myRT

myRT report for GCA_003332265.1_ASM333226v1

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Seq: QPGA01000015.1 Candidatus Accumulibacter phosphatis isolate UW-LDO-IC UW-LDO-IC-MS_14, whole genome shotgun sequence (86548 bp)
Overview 1 RT 1: 40679-46422 bp Neighborhood of RT #1 [40679, 46430] RVT-DGRs YfmG Avd_like AAA_35 LRR YfmG Feature: gene Location: 40679-41200 bp Feature: gene Location: 41248-41637 bp Feature: gene Location: 41827-42936 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42037-42676 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42037-42676 bp Feature: gene Location: 42923-43600 bp Feature: domain Description: YfmG Location: 42971-43082 bp Feature: domain Description: YfmG Location: 42971 -43082 bp Feature: domain Description: Avd_like Location: 43262-43562 bp Feature: domain Description: Avd_like Location: 43262-43562 bp Feature: gene Location: 43710-46430 bp Feature: domain Description: AAA_35 Location: 43767-44784 bp Feature: domain Description: AAA_35 Location: 43767-44784 bp Feature: domain Description: LRR Location: 45129-45507 bp Feature: domain Description: LRR Location: 451 29-45507 bp Feature: domain Description: YfmG Location: 45654-46422 bp Feature: domain Description: YfmG Location: 45654-46422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, YfmG (COG1262), Avd_like (cd16376), AAA_35 (pfam14516), LRR (smart00370)

Seq: QPGA01000070.1 Candidatus Accumulibacter phosphatis isolate UW-LDO-IC UW-LDO-IC-MS_69, whole genome shotgun sequence (14203 bp)
Overview 1 RT 1: 2068-9720 bp Neighborhood of RT #1 [2068, 9720] INT_RitA_C_like PHA02517 AE_Prim_S_like RVT-UG10 Feature: gene Location: 2068-2517 bp Feature: domain Description: INT_RitA_C_like Location: 2143-2284 bp Feature: domain Description: INT_RitA_C_like Location: 2 143-2 2 84 bp Feature: gene Location: 2809-2949 bp Feature: domain Description: PHA02517 Location: 2818-2938 bp Feature: domain Description: PHA02 517 Location: 2 818-2 938 bp Feature: gene Location: 3038-8719 bp Feature: domain Description: AE_Prim_S_like Location: 3176-3473 bp Feature: domain Description: AE_Prim_S_like Location: 3176-3473 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 4469-5117 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 4469-5117 bp Feature: gene Location: 9169-9426 bp Feature: gene Location: 9463-9720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitA_C_like (cd01188), PHA02517 (putative transposase OrfB; Reviewed), AE_Prim_S_like (cl01287), RVT-UG10

Seq: QPGA01000009.1 Candidatus Accumulibacter phosphatis isolate UW-LDO-IC UW-LDO-IC-MS_8, whole genome shotgun sequence (110162 bp)
Overview 1 RT 1: 6833-12804 bp Neighborhood of RT #1 [6833, 12804] PaaI_thioesterase COG5635 YfmG RVT-DGRs Avd_like Feature: gene Location: 6833-7309 bp Feature: domain Description: PaaI_thioesterase Location: 6935-7271 bp Feature: domain Description: PaaI_thioesterase Location: 693 5-7271 bp Feature: gene Location: 7474-10599 bp Feature: domain Description: COG5635 Location: 8323-9565 bp Feature: domain Description: COG563 5 Location: 83 23 -9565 bp Feature: domain Description: YfmG Location: 9682-10579 bp Feature: domain Description: YfmG Location: 9682-10579 bp Feature: gene Location: 10917-12014 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11151-11799 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11151-11799 bp Feature: gene Location: 12058-12462 bp Feature: domain Description: Avd_like Location: 12085-12397 bp Feature: domain Description: Avd_like Location: 12085-123 97 bp Feature: gene Location: 12508-12804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PaaI_thioesterase (cd03443), COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)