myRT

myRT report for GCA_003333315.1_ASM333331v1

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Seq: PSYR01000001.1 Acidiferrobacter thiooxydans strain m-1 Contig1, whole genome shotgun sequence (1428907 bp)
Overview 1 RT 1: 1395549-1401368 bp Neighborhood of RT #1 [1395549, 1401418] LolD RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 1395549-1396319 bp Feature: domain Description: LolD Location: 1395594-1396254 bp Feature: domain Description: LolD Location: 1 395594-1 396254 bp Feature: gene Location: 1397597-1397986 bp Feature: gene Location: 1399109-1400680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1399610-1400303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39961 0-1 400303 bp Feature: gene Location: 1400622-1400777 bp Feature: gene Location: 1401143-1401418 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1401155-1401239 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 401 1 55-1 401 239 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1401260-1401368 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 401 260-1 401 368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: PSYR01000002.1 Acidiferrobacter thiooxydans strain m-1 Contig2, whole genome shotgun sequence (1759369 bp)
Overview 1 RT 1: 617610-623510 bp 2 RT 2: 639385-645754 bp Neighborhood of RT #1 [617610, 623548] Beta_helix Beta_helix RVT-GII GIIM TnpB_IS66 Neighborhood of RT #2 [639385, 645783] ACAD FAAL RVT-GII LasI DUF4902 Feature: gene Location: 617610-617921 bp Feature: gene Location: 618657-620159 bp Feature: domain Description: Beta_helix Location: 619137-619572 bp Feature: domain Description: Beta_helix Location: 619137-619572 bp Feature: domain Description: Beta_helix Location: 619602-619818 bp Feature: domain Description: Beta_helix Location: 619602 -619818 bp Feature: gene Location: 620704-622029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 620965-621583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 0965-62 1583 bp Feature: domain Description: GIIM Note: maturase Location: 621634-621862 bp Feature: domain Description: GIIM Note: maturase Location: 62 1634-62 1862 bp Feature: gene Location: 622815-623186 bp Feature: gene Location: 623192-623548 bp Feature: domain Description: TnpB_IS66 Location: 623219-623510 bp Feature: domain Description: TnpB_IS66 Location: 62 32 19-62 3510 bp Feature: gene Location: 639385-641106 bp Feature: domain Description: ACAD Location: 639490-640519 bp Feature: domain Description: ACAD Location: 639490-640519 bp Feature: gene Location: 641135-642859 bp Feature: domain Description: FAAL Location: 641141-642734 bp Feature: domain Description: FAAL Location: 641141-642 734 bp Feature: gene Location: 643013-644374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643067-643760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643067-643760 bp Feature: gene Location: 644632-645198 bp Feature: domain Description: LasI Location: 644668-645196 bp Feature: domain Description: LasI Location: 644668-645196 bp Feature: gene Location: 645283-645783 bp Feature: domain Description: DUF4902 Location: 645400-645754 bp Feature: domain Description: DUF4902 Location: 645400-645754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Beta_helix (pfam13229), RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717), ACAD (cl09933), FAAL (cd05931), LasI (COG3916), DUF4902 (pfam16245)