myRT

myRT report for GCA_003333685.1_ASM333368v1

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Seq: QOYI01000014.1 Escherichia coli strain MOD1-ECOR49 ECOR49_14_length_152906_cov_179.7, whole genome shotgun sequence (152906 bp)
Overview 1 RT 1: 37318-43561 bp Neighborhood of RT #1 [37318, 43698] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 37318-37584 bp Feature: domain Description: Phage_integrase Location: 37384-37480 bp Feature: domain Description: Phage_integrase Location: 37384-37480 bp Feature: gene Location: 37667-38137 bp Feature: gene Location: 38484-41693 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 39012-39501 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3901 2-39501 bp Feature: domain Description: nitrilase Location: 41007-41604 bp Feature: domain Description: nitrilase Location: 41 007-41 604 bp Feature: gene Location: 41988-42791 bp Feature: domain Description: AbiEi_3_N Location: 42021-42282 bp Feature: domain Description: AbiEi_3_N Location: 42021 -42282 bp Feature: domain Description: AbiEi_3 Location: 42294-42750 bp Feature: domain Description: AbiEi_3 Location: 42294-42750 bp Feature: gene Location: 42778-43698 bp Feature: domain Description: AbiEii Location: 42820-43561 bp Feature: domain Description: AbiEii Location: 42820-43561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: QOYI01000062.1 Escherichia coli strain MOD1-ECOR49 ECOR49_63_length_21627_cov_183.5, whole genome shotgun sequence (21627 bp)
Overview 1 RT 1: 3117-5990 bp Neighborhood of RT #1 [3117, 5998] YesM RVT-GII GIIM group_II_RT_mat Feature: gene Location: 3117-4379 bp Feature: domain Description: YesM Location: 3630-4371 bp Feature: domain Description: YesM Location: 3630-4371 bp Feature: gene Location: 4409-4579 bp Feature: gene Location: 4929-5450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4935-5217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4935-52 17 bp Feature: domain Description: GIIM Note: maturase Location: 5265-5445 bp Feature: domain Description: GIIM Note: maturase Location: 52 65-5445 bp Feature: gene Location: 5433-5660 bp Feature: gene Location: 5666-5998 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5828-5990 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 582 8-5990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)