myRT

myRT report for GCA_003333795.1_ASM333379v1

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Seq: QOYA01000111.1 Escherichia coli strain MOD1-ECOR41 ECOR41_111_length_2272_cov_1460.53, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QOYA01000011.1 Escherichia coli strain MOD1-ECOR41 ECOR41_11_length_120802_cov_137.192, whole genome shotgun sequence (120802 bp)
Overview 1 RT 1: 115676-119558 bp Neighborhood of RT #1 [115676, 119563] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 115676-116134 bp Feature: domain Description: dut Location: 115682-116129 bp Feature: domain Description: dut Location: 115682 -11612 9 bp Feature: gene Location: 116241-116837 bp Feature: domain Description: slmA Location: 116247-116823 bp Feature: domain Description: slmA Location: 1162 47-11682 3 bp Feature: gene Location: 116883-117842 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117018-117567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117018-117567 bp Feature: gene Location: 118140-118796 bp Feature: domain Description: pyrE Location: 118158-118791 bp Feature: domain Description: pyrE Location: 118158-118791 bp Feature: gene Location: 118847-119563 bp Feature: domain Description: rph Location: 118850-119558 bp Feature: domain Description: rph Location: 118850-119558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)