myRT

myRT report for GCA_003333845.1_ASM333384v1

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Seq: QOXZ01000055.1 Escherichia coli strain MOD1-ECOR40 ECOR40_55_length_21536_cov_46.7283, whole genome shotgun sequence (21536 bp)
Overview 1 RT 1: 3608-7949 bp Neighborhood of RT #1 [3608, 7960] InsE PHA02517 RVT-GII GIIM PHA02517 TetR_N TetR_C_28 Feature: gene Location: 3608-3934 bp Feature: domain Description: InsE Location: 3611-3932 bp Feature: domain Description: InsE Location: 361 1 -3932 bp Feature: gene Location: 3934-4413 bp Feature: domain Description: PHA02517 Location: 3994-4348 bp Feature: domain Description: PHA0251 7 Location: 3994-4348 bp Feature: gene Location: 5005-6528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5278-6010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5278-601 0 bp Feature: domain Description: GIIM Note: maturase Location: 6085-6283 bp Feature: domain Description: GIIM Note: maturase Location: 6085-6283 bp Feature: gene Location: 6705-7091 bp Feature: domain Description: PHA02517 Location: 6708-7089 bp Feature: domain Description: PHA0251 7 Location: 6708-7089 bp Feature: gene Location: 7382-7960 bp Feature: domain Description: TetR_N Location: 7451-7586 bp Feature: domain Description: TetR_N Location: 7451 -7586 bp Feature: domain Description: TetR_C_28 Location: 7661-7949 bp Feature: domain Description: TetR_C_28 Location: 7661 -7949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), TetR_N (pfam00440), TetR_C_28 (pfam17937)

Seq: QOXZ01000008.1 Escherichia coli strain MOD1-ECOR40 ECOR40_8_length_149645_cov_47.5575, whole genome shotgun sequence (149645 bp)
Overview 1 RT 1: 115443-119325 bp Neighborhood of RT #1 [115443, 119330] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 115443-115901 bp Feature: domain Description: dut Location: 115449-115896 bp Feature: domain Description: dut Location: 115449-115896 bp Feature: gene Location: 116008-116604 bp Feature: domain Description: slmA Location: 116014-116590 bp Feature: domain Description: slmA Location: 116014-116590 bp Feature: gene Location: 116650-117609 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116785-117334 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116785-117334 bp Feature: gene Location: 117907-118563 bp Feature: domain Description: pyrE Location: 117925-118558 bp Feature: domain Description: pyrE Location: 11792 5-118558 bp Feature: gene Location: 118614-119330 bp Feature: domain Description: rph Location: 118617-119325 bp Feature: domain Description: rph Location: 118617-11932 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)