myRT

myRT report for GCA_003333855.1_ASM333385v1

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Seq: QOXY01000130.1 Escherichia coli strain MOD1-ECOR39 ECOR39_130_length_1326_cov_2538.59, whole genome shotgun sequence (1326 bp)
Overview 1 RT 1: 93-1080 bp Neighborhood of RT #1 [93, 1325] RVT-GII GIIM Feature: gene Location: 93-1325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-807 bp Feature: domain Description: GIIM Note: maturase Location: 882-1080 bp Feature: domain Description: GIIM Note: maturase Location: 882-1 080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QOXY01000207.1 Escherichia coli strain MOD1-ECOR39 ECOR39_216_length_283_cov_2592.49, whole genome shotgun sequence (283 bp)
Overview 1 RT 1: 2-281 bp Neighborhood of RT #1 [2, 280] RVT-GII Feature: gene Location: 2-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188-281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188-2 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QOXY01000036.1 Escherichia coli strain MOD1-ECOR39 ECOR39_36_length_47283_cov_129.624, whole genome shotgun sequence (47283 bp)
Overview 1 RT 1: 11170-15052 bp Neighborhood of RT #1 [11170, 15057] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 11170-11628 bp Feature: domain Description: dut Location: 11176-11623 bp Feature: domain Description: dut Location: 11176-11623 bp Feature: gene Location: 11735-12331 bp Feature: domain Description: slmA Location: 11741-12317 bp Feature: domain Description: slmA Location: 11741-123 17 bp Feature: gene Location: 12377-13336 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12512-13061 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12512-13 061 bp Feature: gene Location: 13634-14290 bp Feature: domain Description: pyrE Location: 13652-14285 bp Feature: domain Description: pyrE Location: 13 652-14285 bp Feature: gene Location: 14341-15057 bp Feature: domain Description: rph Location: 14344-15052 bp Feature: domain Description: rph Location: 143 44-15052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)