myRT

myRT report for GCA_003334225.1_ASM333422v1

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Seq: QOXA01000037.1 Escherichia coli strain MOD1-ECOR15 ECOR15_37_length_40218_cov_57.6949, whole genome shotgun sequence (40218 bp)
Overview 1 RT 1: 3-5777 bp Neighborhood of RT #1 [3, 6355] DUF932 RVT_N RVT-GII YkfC YeeP N6_N4_Mtase Feature: gene Location: 3-518 bp Feature: domain Description: DUF932 Location: 57-495 bp Feature: domain Description: DUF932 Location: 57-495 bp Feature: gene Location: 748-1002 bp Feature: gene Location: 1043-2752 bp Feature: RT Description: RVT_N Location: 1097-1340 bp Feature: RT Description: RVT_N Location: 1 097-1 340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1385-2021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 385-2021 bp Feature: domain Description: YkfC Location: 2141-2357 bp Feature: domain Description: YkfC Location: 21 41 -2357 bp Feature: gene Location: 3047-3910 bp Feature: domain Description: YeeP Location: 3053-3908 bp Feature: domain Description: YeeP Location: 3053-3908 bp Feature: gene Location: 4229-6355 bp Feature: domain Description: N6_N4_Mtase Location: 4709-5777 bp Feature: domain Description: N6_N4_Mtase Location: 4709-5777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), YeeP (COG3596), DUF932 (pfam06067)

Seq: QOXA01000074.1 Escherichia coli strain MOD1-ECOR15 ECOR15_74_length_1930_cov_184.765, whole genome shotgun sequence (1930 bp)
Overview 1 RT 1: 2-1478 bp Neighborhood of RT #1 [2, 1870] RVT-GII Feature: gene Location: 2-229 bp Feature: gene Location: 383-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788-1478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788-1478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII