myRT

myRT report for GCA_003334585.1_ASM333458v1

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Seq: QOYF01000013.1 Escherichia coli strain MOD1-ECOR46 ECOR46_13_length_46050_cov_98, whole genome shotgun sequence (46050 bp)
Overview 1 RT 1: 31775-39476 bp Neighborhood of RT #1 [31775, 39613] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 31775-33028 bp Feature: domain Description: proA Location: 31802-32993 bp Feature: domain Description: proA Location: 31 802-32993 bp Feature: gene Location: 33582-34052 bp Feature: gene Location: 34399-37608 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 34927-35416 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 34927-3541 6 bp Feature: domain Description: nitrilase Location: 36922-37519 bp Feature: domain Description: nitrilase Location: 36922-3751 9 bp Feature: gene Location: 37903-38706 bp Feature: domain Description: AbiEi_3_N Location: 37936-38197 bp Feature: domain Description: AbiEi_3_N Location: 37936-381 97 bp Feature: domain Description: AbiEi_3 Location: 38209-38665 bp Feature: domain Description: AbiEi_3 Location: 38209-38665 bp Feature: gene Location: 38693-39613 bp Feature: domain Description: AbiEii Location: 38735-39476 bp Feature: domain Description: AbiEii Location: 38735-39476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: QOYF01000007.1 Escherichia coli strain MOD1-ECOR46 ECOR46_7_length_466692_cov_97, whole genome shotgun sequence (466692 bp)
Overview 1 RT 1: 327074-332374 bp Neighborhood of RT #1 [327074, 332374] Q RVT-Retrons Feature: gene Location: 327074-328093 bp Feature: domain Description: Q Location: 327077-328088 bp Feature: domain Description: Q Location: 32 7077-32 8088 bp Feature: gene Location: 328136-328843 bp Feature: gene Location: 328840-330030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 328990-329572 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 8990-32 9572 bp Feature: gene Location: 330346-330489 bp Feature: gene Location: 330536-332374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons

Seq: QOYF01000080.1 Escherichia coli strain MOD1-ECOR46 ECOR46_80_length_15732_cov_97, whole genome shotgun sequence (15732 bp)
Overview 1 RT 1: 9593-13575 bp Neighborhood of RT #1 [9593, 13601] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 9593-10624 bp Feature: domain Description: Asparaginase_2 Location: 9683-10616 bp Feature: domain Description: Asparaginase_2 Location: 9683 -10616 bp Feature: gene Location: 10951-11100 bp Feature: gene Location: 11148-11594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11454-11556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11454-11556 bp Feature: gene Location: 11816-12187 bp Feature: gene Location: 12240-13601 bp Feature: domain Description: DcuC Location: 12243-13575 bp Feature: domain Description: DcuC Location: 12243 -13 575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)