myRT

myRT report for GCA_003334895.1_ASM333489v1

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Seq: QPAJ01000010.1 Klebsiella pneumoniae strain JHTS010 tig00005054, whole genome shotgun sequence (115051 bp)
Overview 1 RT 1: 70648-75214 bp Neighborhood of RT #1 [70648, 75216] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms PRK15417 Feature: gene Location: 70648-70881 bp Feature: gene Location: 70969-71523 bp Feature: domain Description: N6_acetyl_AAC6 Location: 70972-71521 bp Feature: domain Description: N6_acetyl_AAC6 Location: 70972-71 521 bp Feature: gene Location: 72142-73497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72436-73060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72436-73060 bp Feature: domain Description: GIIM Note: maturase Location: 73099-73318 bp Feature: domain Description: GIIM Note: maturase Location: 73099-7331 8 bp Feature: gene Location: 73578-74204 bp Feature: domain Description: Arr-ms Location: 73812-74118 bp Feature: domain Description: Arr-ms Location: 7381 2-741 1 8 bp Feature: gene Location: 74203-75216 bp Feature: domain Description: PRK15417 Location: 74206-75214 bp Feature: domain Description: PRK1 541 7 Location: 74206-7521 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), Arr-ms (pfam12120), PRK15417 (integron integrase)

Seq: QPAJ01000014.1 Klebsiella pneumoniae strain JHTS010 tig00005135, whole genome shotgun sequence (83547 bp)
Overview 1 RT 1: 28447-32525 bp 2 RT 2: 55017-59459 bp Neighborhood of RT #1 [28447, 32525] DHFR_1 RVT-GII GIIM N6_acetyl_AAC6 Neighborhood of RT #2 [55017, 59461] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 28447-28665 bp Feature: gene Location: 28662-29159 bp Feature: domain Description: DHFR_1 Location: 28686-29133 bp Feature: domain Description: DHFR_1 Location: 2 8686-2 9133 bp Feature: gene Location: 29578-30933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29872-30496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9872 -30496 bp Feature: domain Description: GIIM Note: maturase Location: 30535-30754 bp Feature: domain Description: GIIM Note: maturase Location: 30535-30754 bp Feature: gene Location: 31553-32107 bp Feature: domain Description: N6_acetyl_AAC6 Location: 31556-32105 bp Feature: domain Description: N6_acetyl_AAC6 Location: 31556-32 105 bp Feature: gene Location: 32097-32525 bp Feature: gene Location: 55017-56288 bp Feature: domain Description: umuC Location: 55020-56280 bp Feature: domain Description: umuC Location: 5502 0-562 80 bp Feature: gene Location: 56288-56971 bp Feature: domain Description: PRK10276 Location: 56591-56954 bp Feature: domain Description: PRK102 76 Location: 56591-56954 bp Feature: gene Location: 57125-58612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57530-58220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57530-582 2 0 bp Feature: gene Location: 58764-59039 bp Feature: domain Description: InsA Location: 58767-59031 bp Feature: domain Description: InsA Location: 58767-59031 bp Feature: gene Location: 58958-59461 bp Feature: domain Description: DDE_Tnp_IS1 Location: 59069-59459 bp Feature: domain Description: DDE_Tnp_IS1 Location: 59069-59459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DHFR_1 (pfam00186), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: QPAJ01000025.1 Klebsiella pneumoniae strain JHTS010 tig00010086, whole genome shotgun sequence (2562885 bp)
Overview 1 RT 1: 1226254-1231137 bp Neighborhood of RT #1 [1226254, 1231139] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 1226254-1227519 bp Feature: domain Description: umuC Location: 1226257-1227517 bp Feature: domain Description: umuC Location: 1226257-1227517 bp Feature: gene Location: 1227744-1227932 bp Feature: gene Location: 1228192-1229100 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1228465-1228921 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1228465-1228921 bp Feature: gene Location: 1229301-1229969 bp Feature: domain Description: PRK09951 Location: 1229304-1229967 bp Feature: domain Description: PRK09951 Location: 12293 04-1229967 bp Feature: gene Location: 1230174-1231139 bp Feature: domain Description: PRK15110 Location: 1230177-1231137 bp Feature: domain Description: PRK15110 Location: 123 0177-123 113 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)