myRT

myRT report for GCA_003334945.1_ASM333494v1

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Seq: QPAE01000006.1 Klebsiella pneumoniae strain JHTS004 tig00000010, whole genome shotgun sequence (335923 bp)
Overview 1 RT 1: 193123-198424 bp Neighborhood of RT #1 [193123, 198429] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 193123-194088 bp Feature: domain Description: PRK15110 Location: 193126-194086 bp Feature: domain Description: PRK1 51 1 0 Location: 1 931 26-1 94086 bp Feature: gene Location: 194293-194961 bp Feature: domain Description: PRK09951 Location: 194296-194959 bp Feature: domain Description: PRK09951 Location: 1 94296-1 94959 bp Feature: gene Location: 195162-196070 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 195435-195891 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 95435-1 95891 bp Feature: gene Location: 196743-198008 bp Feature: domain Description: umuC Location: 196746-198006 bp Feature: domain Description: umuC Location: 1 96746-1 98006 bp Feature: gene Location: 198010-198429 bp Feature: domain Description: PRK10276 Location: 198013-198424 bp Feature: domain Description: PRK1 0276 Location: 1 9801 3-1 98424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: QPAE01000027.1 Klebsiella pneumoniae strain JHTS004 tig00000039, whole genome shotgun sequence (81219 bp)
Overview 1 RT 1: 174-4069 bp 2 RT 2: 26562-31004 bp 3 RT 3: 74633-78706 bp Neighborhood of RT #1 [174, 4069] Arr-ms RVT-GII GIIM N6_acetyl_AAC6 Neighborhood of RT #2 [26562, 31006] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Neighborhood of RT #3 [74633, 78706] DHFR_1 RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 174-437 bp Feature: gene Location: 760-894 bp Feature: domain Description: Arr-ms Location: 766-883 bp Feature: domain Description: Arr-ms Location: 766-883 bp Feature: gene Location: 1121-2290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1229-1853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 9-1853 bp Feature: domain Description: GIIM Note: maturase Location: 1892-2111 bp Feature: domain Description: GIIM Note: maturase Location: 1892 -2 111 bp Feature: gene Location: 3097-3651 bp Feature: domain Description: N6_acetyl_AAC6 Location: 3100-3649 bp Feature: domain Description: N6_acetyl_AAC6 Location: 3100-3649 bp Feature: gene Location: 3641-4069 bp Feature: gene Location: 26562-27833 bp Feature: domain Description: umuC Location: 26565-27825 bp Feature: domain Description: umuC Location: 2 6565-2 782 5 bp Feature: gene Location: 27833-28516 bp Feature: domain Description: PRK10276 Location: 28136-28499 bp Feature: domain Description: PRK102 76 Location: 2 8136-2 8499 bp Feature: gene Location: 28670-30157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29075-29765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9075-2 9765 bp Feature: gene Location: 30309-30584 bp Feature: domain Description: InsA Location: 30312-30576 bp Feature: domain Description: InsA Location: 30312 -30576 bp Feature: gene Location: 30503-31006 bp Feature: domain Description: DDE_Tnp_IS1 Location: 30614-31004 bp Feature: domain Description: DDE_Tnp_IS1 Location: 30614-31004 bp Feature: gene Location: 74633-74851 bp Feature: gene Location: 74848-75345 bp Feature: domain Description: DHFR_1 Location: 74872-75319 bp Feature: domain Description: DHFR_1 Location: 74872 -75319 bp Feature: gene Location: 75765-77120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76059-76683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76059-76683 bp Feature: domain Description: GIIM Note: maturase Location: 76722-76941 bp Feature: domain Description: GIIM Note: maturase Location: 7672 2 -76941 bp Feature: gene Location: 77959-78294 bp Feature: domain Description: N6_acetyl_AAC6 Location: 77983-78292 bp Feature: domain Description: N6_acetyl_AAC6 Location: 77983-782 92 bp Feature: gene Location: 78284-78706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), InsA (COG3677), DDE_Tnp_IS1 (pfam03400), DHFR_1 (pfam00186)

Seq: QPAE01000028.1 Klebsiella pneumoniae strain JHTS004 tig00000040, whole genome shotgun sequence (14440 bp)
Overview 1 RT 1: 3094-6957 bp Neighborhood of RT #1 [3094, 6957] DHFR DHFR_1 RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 3094-3330 bp Feature: domain Description: DHFR Location: 3118-3313 bp Feature: domain Description: DHFR Location: 3 118-3 3 13 bp Feature: gene Location: 3360-3587 bp Feature: domain Description: DHFR_1 Location: 3378-3567 bp Feature: domain Description: DHFR_1 Location: 3 3 78-3 567 bp Feature: gene Location: 4006-5175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4114-4738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4114-473 8 bp Feature: domain Description: GIIM Note: maturase Location: 4777-4996 bp Feature: domain Description: GIIM Note: maturase Location: 4777-4996 bp Feature: gene Location: 6180-6539 bp Feature: domain Description: N6_acetyl_AAC6 Location: 6183-6537 bp Feature: domain Description: N6_acetyl_AAC6 Location: 6183 -653 7 bp Feature: gene Location: 6532-6957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DHFR (cl17279), DHFR_1 (pfam00186), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)

Seq: QPAE01000029.1 Klebsiella pneumoniae strain JHTS004 tig00000041, whole genome shotgun sequence (103940 bp)
Overview 1 RT 1: 97970-102635 bp Neighborhood of RT #1 [97970, 102635] PRK15417 Arr-ms RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 97970-98983 bp Feature: domain Description: PRK15417 Location: 97973-98981 bp Feature: domain Description: PRK154 17 Location: 97973-98981 bp Feature: gene Location: 99015-99608 bp Feature: domain Description: Arr-ms Location: 99216-99522 bp Feature: domain Description: Arr-ms Location: 99216-99522 bp Feature: gene Location: 99689-101044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99983-100607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99983-100607 bp Feature: domain Description: GIIM Note: maturase Location: 100646-100865 bp Feature: domain Description: GIIM Note: maturase Location: 10064 6-100865 bp Feature: gene Location: 101663-102217 bp Feature: domain Description: N6_acetyl_AAC6 Location: 101666-102215 bp Feature: domain Description: N6_acetyl_AAC6 Location: 101666-102215 bp Feature: gene Location: 102207-102635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)