myRT

myRT report for GCA_003334955.1_ASM333495v1

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Seq: QPAI01000003.1 Klebsiella pneumoniae strain JHTS009 tig00000037, whole genome shotgun sequence (332550 bp)
Overview 1 RT 1: 135045-139928 bp Neighborhood of RT #1 [135045, 139930] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 135045-136310 bp Feature: domain Description: umuC Location: 135048-136308 bp Feature: domain Description: umuC Location: 1 35048-1 36308 bp Feature: gene Location: 136535-136723 bp Feature: gene Location: 136983-137891 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 137256-137712 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 37256-1 3771 2 bp Feature: gene Location: 138092-138760 bp Feature: domain Description: PRK09951 Location: 138095-138758 bp Feature: domain Description: PRK09951 Location: 1 38095-1 38758 bp Feature: gene Location: 138965-139930 bp Feature: domain Description: PRK15110 Location: 138968-139928 bp Feature: domain Description: PRK1 51 1 0 Location: 1 38968-1 39928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: QPAI01000004.1 Klebsiella pneumoniae strain JHTS009 tig00000040, whole genome shotgun sequence (180715 bp)
Overview 1 RT 1: 23406-27848 bp 2 RT 2: 71473-75482 bp 3 RT 3: 172681-177347 bp Neighborhood of RT #1 [23406, 27850] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Neighborhood of RT #2 [71473, 75482] DHFR_1 RVT-GII GIIM N6_acetyl_AAC6 Neighborhood of RT #3 [172681, 177347] PRK15417 Arr-ms RVT-GII GIIM RVT-GII N6_acetyl_AAC6 Feature: gene Location: 23406-24677 bp Feature: domain Description: umuC Location: 23409-24669 bp Feature: domain Description: umuC Location: 2 3409-2 4669 bp Feature: gene Location: 24677-25360 bp Feature: domain Description: PRK10276 Location: 24980-25343 bp Feature: domain Description: PRK102 76 Location: 2 4980-2 5343 bp Feature: gene Location: 25514-27001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25919-26609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5919-2 6609 bp Feature: gene Location: 27153-27428 bp Feature: domain Description: InsA Location: 27156-27420 bp Feature: domain Description: InsA Location: 2 7156-2 742 0 bp Feature: gene Location: 27347-27850 bp Feature: domain Description: DDE_Tnp_IS1 Location: 27458-27848 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2 7458-2 7848 bp Feature: gene Location: 71473-71691 bp Feature: gene Location: 71688-72185 bp Feature: domain Description: DHFR_1 Location: 71712-72159 bp Feature: domain Description: DHFR_1 Location: 71712 -72 159 bp Feature: gene Location: 72604-73959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72898-73522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 898-7352 2 bp Feature: domain Description: GIIM Note: maturase Location: 73561-73780 bp Feature: domain Description: GIIM Note: maturase Location: 73561-73780 bp Feature: gene Location: 74578-75132 bp Feature: domain Description: N6_acetyl_AAC6 Location: 74581-75130 bp Feature: domain Description: N6_acetyl_AAC6 Location: 74581-75130 bp Feature: gene Location: 75324-75482 bp Feature: gene Location: 172681-173694 bp Feature: domain Description: PRK15417 Location: 172684-173692 bp Feature: domain Description: PRK15417 Location: 172 684-173692 bp Feature: gene Location: 173726-174319 bp Feature: domain Description: Arr-ms Location: 173927-174233 bp Feature: domain Description: Arr-ms Location: 17392 7-1742 33 bp Feature: gene Location: 174400-175248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174406-174811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174406-174811 bp Feature: domain Description: GIIM Note: maturase Location: 174850-175069 bp Feature: domain Description: GIIM Note: maturase Location: 174850-175069 bp Feature: gene Location: 175280-175756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175574-175727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175574-17572 7 bp Feature: gene Location: 176375-176929 bp Feature: domain Description: N6_acetyl_AAC6 Location: 176378-176927 bp Feature: domain Description: N6_acetyl_AAC6 Location: 176378-17692 7 bp Feature: gene Location: 176919-177347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400), DHFR_1 (pfam00186), GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431), PRK15417 (integron integrase), Arr-ms (pfam12120)