myRT

myRT report for GCA_003334965.1_ASM333496v1

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Seq: QPAH01000002.1 Klebsiella pneumoniae strain JHTS008 tig00000005, whole genome shotgun sequence (759809 bp)
Overview 1 RT 1: 136592-141475 bp Neighborhood of RT #1 [136592, 141477] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 136592-137857 bp Feature: domain Description: umuC Location: 136595-137855 bp Feature: domain Description: umuC Location: 1 36595-1 37855 bp Feature: gene Location: 138082-138270 bp Feature: gene Location: 138530-139438 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 138803-139259 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 38803-1 39259 bp Feature: gene Location: 139639-140307 bp Feature: domain Description: PRK09951 Location: 139642-140305 bp Feature: domain Description: PRK09951 Location: 1 39642-1 40305 bp Feature: gene Location: 140512-141477 bp Feature: domain Description: PRK15110 Location: 140515-141475 bp Feature: domain Description: PRK1 51 1 0 Location: 1 4051 5-1 41 475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: QPAH01000005.1 Klebsiella pneumoniae strain JHTS008 tig00000015, whole genome shotgun sequence (76872 bp)
Overview 1 RT 1: 20799-25241 bp 2 RT 2: 68865-73219 bp Neighborhood of RT #1 [20799, 25243] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Neighborhood of RT #2 [68865, 73219] DHFR_1 RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 20799-22070 bp Feature: domain Description: umuC Location: 20802-22062 bp Feature: domain Description: umuC Location: 2 0802 -2 2 062 bp Feature: gene Location: 22070-22753 bp Feature: domain Description: PRK10276 Location: 22373-22736 bp Feature: domain Description: PRK102 76 Location: 2 2 373-2 2 736 bp Feature: gene Location: 22907-24394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23312-24002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3312 -2 4002 bp Feature: gene Location: 24546-24821 bp Feature: domain Description: InsA Location: 24549-24813 bp Feature: domain Description: InsA Location: 2 4549-2 4813 bp Feature: gene Location: 24740-25243 bp Feature: domain Description: DDE_Tnp_IS1 Location: 24851-25241 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2 4851-2 52 41 bp Feature: gene Location: 68865-69083 bp Feature: gene Location: 69080-69577 bp Feature: domain Description: DHFR_1 Location: 69104-69551 bp Feature: domain Description: DHFR_1 Location: 69104-69551 bp Feature: gene Location: 69996-71351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70290-70914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702 90-70914 bp Feature: domain Description: GIIM Note: maturase Location: 70953-71172 bp Feature: domain Description: GIIM Note: maturase Location: 70953-71172 bp Feature: gene Location: 71970-72524 bp Feature: domain Description: N6_acetyl_AAC6 Location: 71973-72522 bp Feature: domain Description: N6_acetyl_AAC6 Location: 71973-72 52 2 bp Feature: gene Location: 72659-73219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400), DHFR_1 (pfam00186), GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)

Seq: QPAH01000027.1 Klebsiella pneumoniae strain JHTS008 tig00000048, whole genome shotgun sequence (105571 bp)
Overview 1 RT 1: 2184-6748 bp 2 RT 2: 103424-105569 bp Neighborhood of RT #1 [2184, 6750] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms PRK15417 Neighborhood of RT #2 [103424, 105568] N6_acetyl_AAC6 RVT-GII Feature: gene Location: 2184-2417 bp Feature: gene Location: 2505-3059 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2508-3057 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2508-3 057 bp Feature: gene Location: 3862-5031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3970-4594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 970-4594 bp Feature: domain Description: GIIM Note: maturase Location: 4633-4852 bp Feature: domain Description: GIIM Note: maturase Location: 463 3 -4852 bp Feature: gene Location: 5112-5738 bp Feature: domain Description: Arr-ms Location: 5346-5652 bp Feature: domain Description: Arr-ms Location: 53 46-5652 bp Feature: gene Location: 5737-6750 bp Feature: domain Description: PRK15417 Location: 5740-6748 bp Feature: domain Description: PRK15417 Location: 5740-6748 bp Feature: gene Location: 103424-103897 bp Feature: gene Location: 104059-104622 bp Feature: domain Description: N6_acetyl_AAC6 Location: 104149-104542 bp Feature: domain Description: N6_acetyl_AAC6 Location: 104149-104542 bp Feature: gene Location: 105149-105568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105464-105569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105464-105569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), Arr-ms (pfam12120), PRK15417 (integron integrase)

Seq: QPAH01000028.1 Klebsiella pneumoniae strain JHTS008 tig00000049, whole genome shotgun sequence (12369 bp)
Overview 1 RT 1: 6644-11581 bp Neighborhood of RT #1 [6644, 11640] FmrO N6_acetyl_AAC6 RVT-GII GIIM Arr-ms PRK15417 Feature: gene Location: 6644-7423 bp Feature: domain Description: FmrO Location: 6692-7409 bp Feature: domain Description: FmrO Location: 6692-74 09 bp Feature: gene Location: 7830-8384 bp Feature: domain Description: N6_acetyl_AAC6 Location: 7833-8382 bp Feature: domain Description: N6_acetyl_AAC6 Location: 7833-8382 bp Feature: gene Location: 9106-10359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9298-9922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9298-9922 bp Feature: domain Description: GIIM Note: maturase Location: 9961-10180 bp Feature: domain Description: GIIM Note: maturase Location: 9961-10180 bp Feature: gene Location: 10440-10892 bp Feature: domain Description: Arr-ms Location: 10500-10806 bp Feature: domain Description: Arr-ms Location: 10500-10806 bp Feature: gene Location: 11065-11640 bp Feature: domain Description: PRK15417 Location: 11068-11581 bp Feature: domain Description: PRK154 17 Location: 11068-11581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FmrO (pfam07091), N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), Arr-ms (pfam12120), PRK15417 (integron integrase)