myRT

myRT report for GCA_003335065.1_ASM333506v1

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Seq: QPAK01000001.1 Klebsiella pneumoniae strain JHTS012 tig00000003, whole genome shotgun sequence (26428 bp)
Overview 1 RT 1: 1058-5942 bp Neighborhood of RT #1 [1058, 5944] PRK15110 PRK09951 RVT-UG11 umuC Feature: gene Location: 1058-2023 bp Feature: domain Description: PRK15110 Location: 1061-2021 bp Feature: domain Description: PRK1 51 1 0 Location: 1 061 -2021 bp Feature: gene Location: 2229-2897 bp Feature: domain Description: PRK09951 Location: 2232-2895 bp Feature: domain Description: PRK09951 Location: 2232-2895 bp Feature: gene Location: 3098-4006 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3371-3827 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 3371 -3827 bp Feature: gene Location: 4266-4523 bp Feature: gene Location: 4679-5944 bp Feature: domain Description: umuC Location: 4682-5942 bp Feature: domain Description: umuC Location: 4682-5942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)

Seq: QPAK01000011.1 Klebsiella pneumoniae strain JHTS012 tig00006269, whole genome shotgun sequence (88291 bp)
Overview 1 RT 1: 30802-35238 bp 2 RT 2: 57830-61811 bp 3 RT 3: 84941-88288 bp Neighborhood of RT #1 [30802, 35246] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Neighborhood of RT #2 [57830, 61811] N6_acetyl_AAC6 RVT-GII GIIM DHFR_1 Neighborhood of RT #3 [84941, 88288] Rve RVT-GII Feature: gene Location: 30802-31179 bp Feature: domain Description: DDE_Tnp_IS1 Location: 30805-31177 bp Feature: domain Description: DDE_Tnp_IS1 Location: 30805-31177 bp Feature: gene Location: 31224-31499 bp Feature: domain Description: InsA Location: 31227-31491 bp Feature: domain Description: InsA Location: 312 2 7-31491 bp Feature: gene Location: 31651-33138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32056-32746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 056-32 746 bp Feature: gene Location: 33292-33975 bp Feature: domain Description: PRK10276 Location: 33595-33958 bp Feature: domain Description: PRK102 76 Location: 33595-33958 bp Feature: gene Location: 33975-35246 bp Feature: domain Description: umuC Location: 33978-35238 bp Feature: domain Description: umuC Location: 33978-352 38 bp Feature: gene Location: 57830-58063 bp Feature: gene Location: 58151-58705 bp Feature: domain Description: N6_acetyl_AAC6 Location: 58154-58703 bp Feature: domain Description: N6_acetyl_AAC6 Location: 58154-58703 bp Feature: gene Location: 59325-60680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59619-60243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59619-602 43 bp Feature: domain Description: GIIM Note: maturase Location: 60282-60501 bp Feature: domain Description: GIIM Note: maturase Location: 602 82 -60501 bp Feature: gene Location: 61099-61596 bp Feature: domain Description: DHFR_1 Location: 61123-61570 bp Feature: domain Description: DHFR_1 Location: 6112 3-61570 bp Feature: gene Location: 61593-61811 bp Feature: gene Location: 84941-85735 bp Feature: domain Description: Rve Location: 84992-85610 bp Feature: domain Description: Rve Location: 84992 -85610 bp Feature: gene Location: 85734-86168 bp Feature: gene Location: 86880-87908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87174-87798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87174-87798 bp Feature: gene Location: 88097-88288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), N6_acetyl_AAC6 (TIGR04431), GIIM (pfam08388), DHFR_1 (pfam00186), Rve (COG3316)

Seq: QPAK01000020.1 Klebsiella pneumoniae strain JHTS012 tig00013308, whole genome shotgun sequence (26067 bp)
Overview 1 RT 1: 20940-24609 bp Neighborhood of RT #1 [20940, 24653] umuC RVT-UG11 PRK09951 PRK09951 Feature: gene Location: 20940-22205 bp Feature: domain Description: umuC Location: 20943-22203 bp Feature: domain Description: umuC Location: 20943 -22203 bp Feature: gene Location: 22361-22618 bp Feature: gene Location: 22878-23786 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 23151-23607 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 23 151-23 607 bp Feature: gene Location: 23987-24214 bp Feature: domain Description: PRK09951 Location: 23990-24212 bp Feature: domain Description: PRK09951 Location: 23 990-24212 bp Feature: gene Location: 24174-24653 bp Feature: domain Description: PRK09951 Location: 24177-24609 bp Feature: domain Description: PRK09951 Location: 24177-24609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional)

Seq: QPAK01000021.1 Klebsiella pneumoniae strain JHTS012 tig00013309, whole genome shotgun sequence (1341663 bp)
Overview 1 RT 1: 4992-9123 bp Neighborhood of RT #1 [4992, 9125] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 4992-6257 bp Feature: domain Description: umuC Location: 4995-6255 bp Feature: domain Description: umuC Location: 4 995-6255 bp Feature: gene Location: 6482-6670 bp Feature: gene Location: 6930-7838 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 7203-7659 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 7203-7659 bp Feature: gene Location: 8039-8707 bp Feature: domain Description: PRK09951 Location: 8042-8705 bp Feature: domain Description: PRK09951 Location: 804 2-8705 bp Feature: gene Location: 8913-9125 bp Feature: domain Description: PRK15110 Location: 8916-9123 bp Feature: domain Description: PRK15110 Location: 8916-9123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: QPAK01000022.1 Klebsiella pneumoniae strain JHTS012 tig00013310, whole genome shotgun sequence (111832 bp)
Overview 1 RT 1: 84781-89447 bp Neighborhood of RT #1 [84781, 89447] PRK15417 Arr-ms RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 84781-85794 bp Feature: domain Description: PRK15417 Location: 84784-85792 bp Feature: domain Description: PRK15 417 Location: 84784-85 792 bp Feature: gene Location: 85826-86419 bp Feature: domain Description: Arr-ms Location: 86027-86333 bp Feature: domain Description: Arr-ms Location: 86027-86333 bp Feature: gene Location: 86500-87855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86794-87418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86794-87418 bp Feature: domain Description: GIIM Note: maturase Location: 87457-87676 bp Feature: domain Description: GIIM Note: maturase Location: 8745 7-87676 bp Feature: gene Location: 88475-89029 bp Feature: domain Description: N6_acetyl_AAC6 Location: 88478-89027 bp Feature: domain Description: N6_acetyl_AAC6 Location: 88478-89027 bp Feature: gene Location: 89019-89447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)