myRT

myRT report for GCA_003335695.1_ASM333569v1

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Seq: QOJE01000334.1 Enterococcus faecium strain IHC16 IHC16_contig_108_consensus_1, whole genome shotgun sequence (1901 bp)
Overview 1 RT 1: 437-1646 bp Neighborhood of RT #1 [437, 1825] RVT-GII GIIM Feature: gene Location: 437-1825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-1373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-1 373 bp Feature: domain Description: GIIM Note: maturase Location: 1430-1646 bp Feature: domain Description: GIIM Note: maturase Location: 1 430-1 646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QOJE01000519.1 Enterococcus faecium strain IHC16 IHC16_contig_154_consensus_1, whole genome shotgun sequence (5815 bp)
Overview 1 RT 1: 2243-5753 bp Neighborhood of RT #1 [2243, 5753] ArdA RVT-GII HNHc Feature: gene Location: 2243-2740 bp Feature: domain Description: ArdA Location: 2261-2726 bp Feature: domain Description: ArdA Location: 2 2 61-2 72 6 bp Feature: gene Location: 2857-3024 bp Feature: gene Location: 3185-5095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3518-4256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3518-42 56 bp Feature: domain Description: HNHc Note: nucleases Location: 4811-4976 bp Feature: domain Description: HNHc Note: nucleases Location: 4811-4976 bp Feature: gene Location: 5604-5753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507)

Seq: QOJE01000455.1 Enterococcus faecium strain IHC16 IHC16_contig_193_consensus_1, whole genome shotgun sequence (4349 bp)
Overview 1 RT 1: 3-3408 bp Neighborhood of RT #1 [3, 4235] AAA_10 RVT-GII Feature: gene Location: 3-149 bp Feature: gene Location: 162-1712 bp Feature: domain Description: AAA_10 Location: 1491-1674 bp Feature: domain Description: AAA_10 Location: 1491-1674 bp Feature: gene Location: 2409-4235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2709-3408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2709-3 408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII

Seq: QOJE01000542.1 Enterococcus faecium strain IHC16 IHC16_contig_81_consensus_1, whole genome shotgun sequence (6542 bp)
Overview 1 RT 1: 2547-5879 bp Neighborhood of RT #1 [2547, 6541] RMtype1_S_TRD-CR_like HsdM RVT-AbiP2 Feature: gene Location: 2547-3134 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2736-3057 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2736-3057 bp Feature: gene Location: 3127-4749 bp Feature: domain Description: HsdM Location: 3148-4675 bp Feature: domain Description: HsdM Location: 314 8-4 675 bp Feature: gene Location: 5087-6541 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5414-5879 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 54 14 -5879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_TRD-CR_like (cl38903), HsdM (COG0286), RVT-AbiP2