myRT

myRT report for GCA_003336825.1_ASM333682v1

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Seq: QPMG01000001.1 Proteus sp. CA142267 Scaffold1_1, whole genome shotgun sequence (1242037 bp)
Overview 1 RT 1: 164081-167923 bp 2 RT 2: 370131-372965 bp Neighborhood of RT #1 [164081, 167967] PRK10040 PRK09678 RVT-UG12 D COG3499 Neighborhood of RT #2 [370131, 372967] RVT-UG4 FimA Feature: gene Location: 164081-164284 bp Feature: domain Description: PRK10040 Location: 164111-164258 bp Feature: domain Description: PRK1 0040 Location: 1 641 1 1 -1 64258 bp Feature: gene Location: 164331-164549 bp Feature: domain Description: PRK09678 Location: 164334-164541 bp Feature: domain Description: PRK09678 Location: 1 64334-1 64541 bp Feature: gene Location: 164661-166379 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 165018-165471 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 6501 8-1 65471 bp Feature: gene Location: 166409-167506 bp Feature: domain Description: D Location: 166430-167486 bp Feature: domain Description: D Location: 1 66430-1 67486 bp Feature: gene Location: 167506-167967 bp Feature: domain Description: COG3499 Location: 167509-167923 bp Feature: domain Description: COG3499 Location: 1 67509-1 67923 bp Feature: gene Location: 370131-370346 bp Feature: gene Location: 370555-371346 bp Feature: gene Location: 371466-372053 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 371586-372027 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 371 586-372027 bp Feature: gene Location: 372180-372356 bp Feature: gene Location: 372353-372967 bp Feature: domain Description: FimA Location: 372380-372965 bp Feature: domain Description: FimA Location: 372380-372965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10040 (hypothetical protein; Provisional), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG12, D (PHA02561), COG3499 (Phage protein U ), RVT-UG4, FimA (pfam16970)

Seq: QPMG01000004.1 Proteus sp. CA142267 Scaffold4_1, whole genome shotgun sequence (265640 bp)
Overview 1 RT 1: 236230-242158 bp Neighborhood of RT #1 [236230, 242158] Arm-DNA-bind_1 INT_Lambda_C PRK07006 RVT-Retrons AAA_15 AAA_21 Feature: gene Location: 236230-237357 bp Feature: domain Description: Arm-DNA-bind_1 Location: 236233-236446 bp Feature: domain Description: Arm-DNA-bind_1 Location: 2 362 33-2 36446 bp Feature: domain Description: INT_Lambda_C Location: 236824-237340 bp Feature: domain Description: INT_Lambda_C Location: 2 3682 4-2 37340 bp Feature: gene Location: 237478-237825 bp Feature: domain Description: PRK07006 Location: 237646-237823 bp Feature: domain Description: PRK07006 Location: 2 37646-2 3782 3 bp Feature: gene Location: 238003-239160 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 238189-238750 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 38189-2 38750 bp Feature: gene Location: 239331-241394 bp Feature: domain Description: AAA_15 Location: 239343-240351 bp Feature: domain Description: AAA_15 Location: 2 39343-2 40351 bp Feature: domain Description: AAA_21 Location: 240762-240999 bp Feature: domain Description: AAA_2 1 Location: 2 40762 -2 40999 bp Feature: gene Location: 241517-242158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_1 (pfam09003), INT_Lambda_C (cd00800), PRK07006 (isocitrate dehydrogenase; Reviewed), RVT-Retrons, AAA_15 (pfam13175), AAA_21 (pfam13304)