myRT

myRT report for GCA_003336995.1_ASM333699v1

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Seq: MAML01000117.1 Escherichia coli strain IHIT23725 NODE_39_length_26178_cov_9.52251_ID_77, whole genome shotgun sequence (26178 bp)
Overview 1 RT 1: 10404-13560 bp Neighborhood of RT #1 [10404, 13577] DDE_Tnp_IS1 InsA RVT-GII PRK10276 Feature: gene Location: 10404-10781 bp Feature: domain Description: DDE_Tnp_IS1 Location: 10407-10779 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 0407-1 0779 bp Feature: gene Location: 10826-11101 bp Feature: domain Description: InsA Location: 10829-11093 bp Feature: domain Description: InsA Location: 1 0829-1 1 093 bp Feature: gene Location: 11253-12263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11259-11871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 259-1 1 871 bp Feature: gene Location: 12375-12740 bp Feature: gene Location: 12765-13577 bp Feature: domain Description: PRK10276 Location: 13197-13560 bp Feature: domain Description: PRK1 0276 Location: 1 31 97-1 3560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: MAML01000134.1 Escherichia coli strain IHIT23725 NODE_54_length_11692_cov_15.7939_ID_107, whole genome shotgun sequence (11692 bp)
Overview 1 RT 1: 67-3702 bp Neighborhood of RT #1 [67, 3722] RVT-UG8 RVT-UG3 PRK09678 Psu Feature: gene Location: 67-1230 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 640-1093 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 640-1093 bp Feature: gene Location: 1221-2498 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1509-2004 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1509-2 004 bp Feature: gene Location: 2893-3165 bp Feature: domain Description: PRK09678 Location: 2902-3067 bp Feature: domain Description: PRK09678 Location: 2 902 -3067 bp Feature: gene Location: 3171-3722 bp Feature: domain Description: Psu Location: 3192-3702 bp Feature: domain Description: Psu Location: 3192 -3702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)