myRT

myRT report for GCA_003337375.1_ASM333737v1

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Seq: QPJD01000002.1 Paenibacillus prosopidis strain CECT 7506 Ga0244617_102, whole genome shotgun sequence (509825 bp)
Overview 1 RT 1: 34003-38175 bp Neighborhood of RT #1 [34003, 38246] gmd RVT-GII GT4_PimA-like Feature: gene Location: 34003-34326 bp Feature: gene Location: 34389-35504 bp Feature: domain Description: gmd Location: 34398-35445 bp Feature: domain Description: gmd Location: 34398-35445 bp Feature: gene Location: 35763-35945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35766-35898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35766-35898 bp Feature: gene Location: 36138-36455 bp Feature: gene Location: 36615-38246 bp Feature: domain Description: GT4_PimA-like Location: 37467-38175 bp Feature: domain Description: GT4_PimA-like Location: 37467-381 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gmd (TIGR01472), RVT-GII, GT4_PimA-like (cd03801)

Seq: QPJD01000003.1 Paenibacillus prosopidis strain CECT 7506 Ga0244617_103, whole genome shotgun sequence (433897 bp)
Overview 1 RT 1: 294916-300053 bp Neighborhood of RT #1 [294916, 300058] GRAS RVT-GII RVT-GII GIIM APH_6_hur BLMA_like Feature: gene Location: 294916-295098 bp Feature: gene Location: 295214-296374 bp Feature: domain Description: GRAS Location: 295355-296243 bp Feature: domain Description: GRAS Location: 2 95355-2 962 43 bp Feature: gene Location: 297009-297389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297309-297381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 97309-2 97381 bp Feature: gene Location: 297502-298296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297505-297937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 97505-2 97937 bp Feature: domain Description: GIIM Note: maturase Location: 298036-298234 bp Feature: domain Description: GIIM Note: maturase Location: 2 98036-2 982 34 bp Feature: gene Location: 298529-299446 bp Feature: domain Description: APH_6_hur Location: 298727-299378 bp Feature: domain Description: APH_6_hur Location: 2 9872 7-2 99378 bp Feature: gene Location: 299714-300058 bp Feature: domain Description: BLMA_like Location: 299747-300053 bp Feature: domain Description: BLMA_like Location: 2 99747-300053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GRAS (pfam03514), RVT-GII, GIIM (pfam08388), APH_6_hur (pfam04655), BLMA_like (cd08349)

Seq: QPJD01000038.1 Paenibacillus prosopidis strain CECT 7506 Ga0244617_138, whole genome shotgun sequence (8026 bp)
Overview 1 RT 1: 566-5092 bp Neighborhood of RT #1 [566, 5092] DUF3888 RVT-GII GIIM Feature: gene Location: 566-1123 bp Feature: gene Location: 1447-1698 bp Feature: domain Description: DUF3888 Location: 1450-1681 bp Feature: domain Description: DUF3 888 Location: 1450-1681 bp Feature: gene Location: 2231-3583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2537-3173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253 7-3 173 bp Feature: domain Description: GIIM Note: maturase Location: 3251-3482 bp Feature: domain Description: GIIM Note: maturase Location: 3 251-3 482 bp Feature: gene Location: 4004-4135 bp Feature: gene Location: 4454-5092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3888 (pfam13027), RVT-GII, GIIM (pfam08388)

Seq: QPJD01000068.1 Paenibacillus prosopidis strain CECT 7506 Ga0244617_168, whole genome shotgun sequence (1956 bp)
Overview 1 RT 1: 37-1923 bp Neighborhood of RT #1 [37, 1923] RVT-GII GIIM Feature: gene Location: 37-1416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 3-979 bp Feature: domain Description: GIIM Note: maturase Location: 1057-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1057-1294 bp Feature: gene Location: 1441-1923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QPJD01000069.1 Paenibacillus prosopidis strain CECT 7506 Ga0244617_169, whole genome shotgun sequence (1903 bp)
Overview 1 RT 1: 292-1450 bp Neighborhood of RT #1 [292, 1833] RVT-GII Feature: gene Location: 292-1833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-1450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-145 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII