myRT

myRT report for GCA_003340495.1_ASM334049v1

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Seq: QASA01000001.1 Adhaeribacter sp. HMF7616 contig00001, whole genome shotgun sequence (6256781 bp)
Overview 1 RT 1: 684764-692137 bp 2 RT 2: 2674983-2680241 bp 3 RT 3: 4150783-4155980 bp 4 RT 4: 5828572-5831754 bp 5 RT 5: 5847671-5850914 bp Neighborhood of RT #1 [684764, 692145] Pentapeptide_4 Pentapeptide_4 RAYT group_II_RT_mat RVT-UG19 PRK03643 UxaC Neighborhood of RT #2 [2674983, 2680279] TolC RVT-GII GIIM TMR_SDR_a Neighborhood of RT #3 [4150783, 4155980] HEAT_2 HEAT_2 PpiB RVT-GII GIIM Neighborhood of RT #4 [5828572, 5831754] LprI RVT-GII GIIM Neighborhood of RT #5 [5847671, 5850914] HTH_Tnp_4 RVT-GII GIIM Feature: gene Location: 684764-685333 bp Feature: domain Description: Pentapeptide_4 Location: 684836-685013 bp Feature: domain Description: Pentapeptide_4 Location: 684836-68501 3 bp Feature: domain Description: Pentapeptide_4 Location: 685034-685226 bp Feature: domain Description: Pentapeptide_4 Location: 685034-685226 bp Feature: gene Location: 685520-686071 bp Feature: domain Description: RAYT Location: 685562-685997 bp Feature: domain Description: RAYT Location: 685562-685997 bp Feature: gene Location: 686354-688465 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 686483-686648 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 686483-686648 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 686735-687227 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 686735-687227 bp Feature: gene Location: 689049-690569 bp Feature: domain Description: PRK03643 Location: 689112-690513 bp Feature: domain Description: PRK03643 Location: 6891 1 2-69051 3 bp Feature: gene Location: 690700-692145 bp Feature: domain Description: UxaC Location: 690754-692137 bp Feature: domain Description: UxaC Location: 690754-6921 37 bp Feature: gene Location: 2674983-2676398 bp Feature: domain Description: TolC Location: 2675028-2676396 bp Feature: domain Description: TolC Location: 2675028-2676396 bp Feature: gene Location: 2676841-2677149 bp Feature: gene Location: 2677225-2678541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2677420-2678035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2677420-2678035 bp Feature: domain Description: GIIM Note: maturase Location: 2678107-2678320 bp Feature: domain Description: GIIM Note: maturase Location: 26781 07-2678320 bp Feature: gene Location: 2678712-2679023 bp Feature: gene Location: 2679431-2680279 bp Feature: domain Description: TMR_SDR_a Location: 2679446-2680241 bp Feature: domain Description: TMR_SDR_a Location: 2679446-2680241 bp Feature: gene Location: 4150783-4152711 bp Feature: domain Description: HEAT_2 Location: 4150930-4151107 bp Feature: domain Description: HEAT_2 Location: 41 50930-41 51 1 07 bp Feature: domain Description: HEAT_2 Location: 4151326-4151578 bp Feature: domain Description: HEAT_2 Location: 41 51 326-41 51 578 bp Feature: domain Description: PpiB Location: 4152304-4152688 bp Feature: domain Description: PpiB Location: 41 52304-41 52688 bp Feature: gene Location: 4152983-4153492 bp Feature: gene Location: 4153557-4154873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4153752-4154367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 53752-41 54367 bp Feature: domain Description: GIIM Note: maturase Location: 4154439-4154652 bp Feature: domain Description: GIIM Note: maturase Location: 41 54439-41 54652 bp Feature: gene Location: 4154934-4155110 bp Feature: gene Location: 4155459-4155980 bp Feature: gene Location: 5828572-5828721 bp Feature: gene Location: 5828988-5829479 bp Feature: domain Description: LprI Location: 5829117-5829429 bp Feature: domain Description: LprI Location: 58291 1 7-5829429 bp Feature: gene Location: 5829539-5830855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5829734-5830349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5829734-5830349 bp Feature: domain Description: GIIM Note: maturase Location: 5830421-5830634 bp Feature: domain Description: GIIM Note: maturase Location: 5830421 -5830634 bp Feature: gene Location: 5831026-5831364 bp Feature: gene Location: 5831398-5831754 bp Feature: gene Location: 5847671-5848114 bp Feature: domain Description: HTH_Tnp_4 Location: 5847821-5847968 bp Feature: domain Description: HTH_Tnp_4 Location: 5847821 -5847968 bp Feature: gene Location: 5848182-5848538 bp Feature: gene Location: 5848552-5849868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5848747-5849362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5848747-5849362 bp Feature: domain Description: GIIM Note: maturase Location: 5849434-5849647 bp Feature: domain Description: GIIM Note: maturase Location: 5849434-5849647 bp Feature: gene Location: 5849929-5850105 bp Feature: gene Location: 5850414-5850914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pentapeptide_4 (pfam13599), RAYT (COG1943), group_II_RT_mat (TIGR04416), RVT-UG19, PRK03643 (tagaturonate reductase), UxaC (pfam02614), TolC (COG1538), RVT-GII, GIIM (pfam08388), TMR_SDR_a (cd05269)
HEAT_2 (pfam13646), PpiB (COG0652), LprI (pfam07007), HTH_Tnp_4 (pfam13613)