myRT

myRT report for GCA_003340715.1_ASM334071v1

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Seq: QPMA01000155.1 Escherichia coli strain KCJK6936 NODE_18_length_107898_cov_11.7842_ID_35, whole genome shotgun sequence (107898 bp)
Overview 1 RT 1: 3-3223 bp Neighborhood of RT #1 [3, 3223] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 3-149 bp Feature: domain Description: DUF932 Location: 15-141 bp Feature: domain Description: DUF932 Location: 1 5-1 41 bp Feature: gene Location: 641-2419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902-1 697 bp Feature: domain Description: Intron_maturas2 Location: 1823-2048 bp Feature: domain Description: Intron_maturas2 Location: 1 823-2048 bp Feature: domain Description: HNHc Note: nucleases Location: 2243-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2243-2393 bp Feature: gene Location: 2592-2978 bp Feature: domain Description: DUF932 Location: 2598-2943 bp Feature: domain Description: DUF932 Location: 2598-2943 bp Feature: gene Location: 2978-3223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QPMA01000269.1 Escherichia coli strain KCJK6936 NODE_54_length_28749_cov_12.7971_ID_107, whole genome shotgun sequence (28749 bp)
Overview 1 RT 1: 2-3643 bp Neighborhood of RT #1 [2, 3643] RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 2-169 bp Feature: gene Location: 342-2120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603-1398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603-1398 bp Feature: domain Description: Intron_maturas2 Location: 1524-1749 bp Feature: domain Description: Intron_maturas2 Location: 152 4-1749 bp Feature: domain Description: HNHc Note: nucleases Location: 1944-2094 bp Feature: domain Description: HNHc Note: nucleases Location: 1944-2 094 bp Feature: gene Location: 2612-3013 bp Feature: domain Description: DUF932 Location: 2723-3005 bp Feature: domain Description: DUF932 Location: 2 72 3-3005 bp Feature: gene Location: 3233-3643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)