myRT

myRT report for GCA_003344785.1_ASM334478v1

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Seq: QPMK01000003.1 Thalassococcus sp. WRAS1 scaffold_2, whole genome shotgun sequence (584048 bp)
Overview 1 RT 1: 233539-237745 bp Neighborhood of RT #1 [233539, 237768] RVT-CRISPR Cas_Cas1 Cas2_I_II_III CRISPR_Cas6 Feature: gene Location: 233539-235479 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 233707-234313 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 233707-23431 3 bp Feature: domain Description: Cas_Cas1 Location: 234481-235333 bp Feature: domain Description: Cas_Cas1 Location: 234481 -235333 bp Feature: gene Location: 236103-236393 bp Feature: domain Description: Cas2_I_II_III Location: 236130-236352 bp Feature: domain Description: Cas2_I_II_III Location: 2361 30-236352 bp Feature: gene Location: 237025-237768 bp Feature: domain Description: CRISPR_Cas6 Location: 237388-237745 bp Feature: domain Description: CRISPR_Cas6 Location: 237388-237745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040)

Seq: QPMK01000050.1 Thalassococcus sp. WRAS1 scaffold_49, whole genome shotgun sequence (1097 bp)
Overview 1 RT 1: 3-1068 bp Neighborhood of RT #1 [3, 1094] RVT-UNC Feature: gene Location: 3-1094 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 477-1068 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 477-1068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-UG1(RVT-UNC)

Seq: QPMK01000055.1 Thalassococcus sp. WRAS1 scaffold_54, whole genome shotgun sequence (849 bp)
Overview 1 RT 1: 29-188 bp Neighborhood of RT #1 [29, 847] RVT-UG28b Feature: gene Location: 29-847 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 56-188 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 56-188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b

Seq: QPMK01000079.1 Thalassococcus sp. WRAS1 scaffold_79, whole genome shotgun sequence (555 bp)
Overview 1 RT 1: 1-424 bp Neighborhood of RT #1 [1, 552] RVT-UNC Feature: gene Location: 1-552 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 31-424 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 31-4 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: QPMK01000081.1 Thalassococcus sp. WRAS1 scaffold_81, whole genome shotgun sequence (551 bp)
Overview 1 RT 1: 1-430 bp Neighborhood of RT #1 [1, 549] RVT-CRISPR-like Feature: gene Location: 1-549 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 34-430 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 34-430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR