myRT

myRT report for GCA_003346435.1_ASM334643v1

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Seq: QQQQ01000016.1 Klebsiella pneumoniae strain Q5_Kp Q5_S8__contig_16, whole genome shotgun sequence (272142 bp)
Overview 1 RT 1: 264623-271491 bp Neighborhood of RT #1 [264623, 271493] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264623-265351 bp Feature: domain Description: FimC Location: 264671-265334 bp Feature: domain Description: FimC Location: 264671 -265334 bp Feature: gene Location: 265383-267992 bp Feature: domain Description: FimD Location: 265440-267981 bp Feature: domain Description: FimD Location: 265440-267981 bp Feature: gene Location: 267992-270070 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268400-268844 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268400-268844 bp Feature: gene Location: 270127-270567 bp Feature: domain Description: Integrase_1 Location: 270133-270349 bp Feature: domain Description: Integrase_1 Location: 2701 33-270349 bp Feature: gene Location: 270828-271493 bp Feature: domain Description: INT_P4_C Location: 270933-271491 bp Feature: domain Description: INT_P4_C Location: 270933-271 491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: QQQQ01000002.1 Klebsiella pneumoniae strain Q5_Kp Q5_S8__contig_2, whole genome shotgun sequence (51424 bp)
Overview 1 RT 1: 43493-46677 bp Neighborhood of RT #1 [43493, 46677] PRK10276 RVT-GII Feature: gene Location: 43493-43918 bp Feature: domain Description: PRK10276 Location: 43496-43904 bp Feature: domain Description: PRK102 76 Location: 43496-43904 bp Feature: gene Location: 44036-44269 bp Feature: gene Location: 44320-45831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44725-45439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4472 5-45439 bp Feature: gene Location: 46065-46295 bp Feature: gene Location: 46354-46677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII