myRT

myRT report for GCA_003346495.1_ASM334649v1

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Seq: QQQO01000001.1 Klebsiella pneumoniae strain H5_Kp H5_S3__contig_1, whole genome shotgun sequence (272046 bp)
Overview 1 RT 1: 649-7502 bp Neighborhood of RT #1 [649, 7519] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 649-1314 bp Feature: domain Description: INT_P4_C Location: 754-1312 bp Feature: domain Description: INT_P4_C Location: 754-1 31 2 bp Feature: gene Location: 1575-2015 bp Feature: domain Description: Integrase_1 Location: 1581-1797 bp Feature: domain Description: Integrase_1 Location: 1 581 -1 797 bp Feature: gene Location: 2072-4150 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2480-2924 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2480-2924 bp Feature: gene Location: 4150-6759 bp Feature: domain Description: FimD Location: 4207-6748 bp Feature: domain Description: FimD Location: 4207-6748 bp Feature: gene Location: 6791-7519 bp Feature: domain Description: FimC Location: 6839-7502 bp Feature: domain Description: FimC Location: 6839-7502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: QQQO01000024.1 Klebsiella pneumoniae strain H5_Kp H5_S3__contig_24, whole genome shotgun sequence (51695 bp)
Overview 1 RT 1: 43497-46681 bp Neighborhood of RT #1 [43497, 46681] PRK10276 RVT-GII Feature: gene Location: 43497-43922 bp Feature: domain Description: PRK10276 Location: 43500-43908 bp Feature: domain Description: PRK102 76 Location: 43500-43908 bp Feature: gene Location: 44040-44273 bp Feature: gene Location: 44324-45835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44729-45443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4472 9-45443 bp Feature: gene Location: 46069-46299 bp Feature: gene Location: 46358-46681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII