myRT

myRT report for GCA_003346525.1_ASM334652v1

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Seq: QQQN01000011.1 Klebsiella pneumoniae strain M5_Kp M5_S9__contig_11, whole genome shotgun sequence (272113 bp)
Overview 1 RT 1: 264594-271462 bp Neighborhood of RT #1 [264594, 271464] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264594-265322 bp Feature: domain Description: FimC Location: 264642-265305 bp Feature: domain Description: FimC Location: 264642-265305 bp Feature: gene Location: 265354-267963 bp Feature: domain Description: FimD Location: 265411-267952 bp Feature: domain Description: FimD Location: 26541 1 -267952 bp Feature: gene Location: 267963-270041 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268371-268815 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268371 -26881 5 bp Feature: gene Location: 270098-270538 bp Feature: domain Description: Integrase_1 Location: 270104-270320 bp Feature: domain Description: Integrase_1 Location: 2701 04-270320 bp Feature: gene Location: 270799-271464 bp Feature: domain Description: INT_P4_C Location: 270904-271462 bp Feature: domain Description: INT_P4_C Location: 270904-271 462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: QQQN01000050.1 Klebsiella pneumoniae strain M5_Kp M5_S9__contig_51, whole genome shotgun sequence (8775 bp)
Overview 1 RT 1: 576-3760 bp Neighborhood of RT #1 [576, 3760] PRK10276 RVT-GII Feature: gene Location: 576-1001 bp Feature: domain Description: PRK10276 Location: 579-987 bp Feature: domain Description: PRK102 76 Location: 579-987 bp Feature: gene Location: 1119-1352 bp Feature: gene Location: 1403-2914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1808-2522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1808-2 52 2 bp Feature: gene Location: 2800-3378 bp Feature: gene Location: 3437-3760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII