myRT

myRT report for GCA_003346535.1_ASM334653v1

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Seq: QQQM01000042.1 Klebsiella pneumoniae strain L5_Kp L5_S2__contig_42, whole genome shotgun sequence (51835 bp)
Overview 1 RT 1: 43560-46744 bp Neighborhood of RT #1 [43560, 46744] PRK10276 RVT-GII Feature: gene Location: 43560-43985 bp Feature: domain Description: PRK10276 Location: 43563-43971 bp Feature: domain Description: PRK1 0276 Location: 43563-43971 bp Feature: gene Location: 44103-44336 bp Feature: gene Location: 44387-45898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44792-45506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44792-45506 bp Feature: gene Location: 46132-46362 bp Feature: gene Location: 46421-46744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: QQQM01000006.1 Klebsiella pneumoniae strain L5_Kp L5_S2__contig_6, whole genome shotgun sequence (272303 bp)
Overview 1 RT 1: 264528-271396 bp Neighborhood of RT #1 [264528, 271398] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264528-265256 bp Feature: domain Description: FimC Location: 264576-265239 bp Feature: domain Description: FimC Location: 2 64576-2 652 39 bp Feature: gene Location: 265288-267897 bp Feature: domain Description: FimD Location: 265345-267886 bp Feature: domain Description: FimD Location: 2 65345-2 67886 bp Feature: gene Location: 267897-269975 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268305-268749 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 68305-2 68749 bp Feature: gene Location: 270032-270472 bp Feature: domain Description: Integrase_1 Location: 270038-270254 bp Feature: domain Description: Integrase_1 Location: 2 70038-2 702 54 bp Feature: gene Location: 270733-271398 bp Feature: domain Description: INT_P4_C Location: 270838-271396 bp Feature: domain Description: INT_P4_C Location: 2 70838-2 71396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)