myRT

myRT report for GCA_003346575.1_ASM334657v1

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Seq: QQQP01000010.1 Klebsiella pneumoniae strain K5_Kp K5_S10__contig_10, whole genome shotgun sequence (272048 bp)
Overview 1 RT 1: 650-7503 bp Neighborhood of RT #1 [650, 7520] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 650-1315 bp Feature: domain Description: INT_P4_C Location: 755-1313 bp Feature: domain Description: INT_P4_C Location: 755-1 31 3 bp Feature: gene Location: 1576-2016 bp Feature: domain Description: Integrase_1 Location: 1582-1798 bp Feature: domain Description: Integrase_1 Location: 1 582-1 798 bp Feature: gene Location: 2073-4151 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2481-2925 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2481 -2925 bp Feature: gene Location: 4151-6760 bp Feature: domain Description: FimD Location: 4208-6749 bp Feature: domain Description: FimD Location: 4208-6749 bp Feature: gene Location: 6792-7520 bp Feature: domain Description: FimC Location: 6840-7503 bp Feature: domain Description: FimC Location: 6840-7503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: QQQP01000036.1 Klebsiella pneumoniae strain K5_Kp K5_S10__contig_36, whole genome shotgun sequence (51697 bp)
Overview 1 RT 1: 43498-46682 bp Neighborhood of RT #1 [43498, 46682] PRK10276 RVT-GII Feature: gene Location: 43498-43923 bp Feature: domain Description: PRK10276 Location: 43501-43909 bp Feature: domain Description: PRK102 76 Location: 43501-43909 bp Feature: gene Location: 44041-44274 bp Feature: gene Location: 44325-45836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44730-45444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44730-45444 bp Feature: gene Location: 46070-46300 bp Feature: gene Location: 46359-46682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII